| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BamMC406_1140 |
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| Symbol | |
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| ID | 6179026 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria MC40-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010551 |
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| Strand | + |
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| Start bp | 1263374 |
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| End bp | 1264804 |
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| Gene Length | 1431 bp |
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| Protein Length | 476 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 641680896 |
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| Product | permease for cytosine/purines uracil thiamine allantoin |
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| Protein accession | YP_001807847 |
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| Protein GI | 172060195 |
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| COG category | [F] Nucleotide transport and metabolism |
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| COG ID | [COG1457] Purine-cytosine permease and related proteins |
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| TIGRFAM ID | [TIGR00800] NCS1 nucleoside transporter family |
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Plasmid Coverage information |
| Num covering plasmid clones | 29 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 0.146583 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGTCAACGA ATCCCAGTGG AAAAGCCGGC GGCCTGATCG AGGTACGCTC GATCGATTTC
ATTCCCGACG CCGAACGCCA CGGCGGGCTG CTGAGCCAGT TCACGCTGTG GCTGTCGGCG
AACATGCAGA TCACGGCCAT CGTCACGGGG GCGCTCGCGG TCGTGCTCGG CGGCGACGTG
TTCTGGTCGC TGGTCGCGCT GCTGCTCGGC CAGCTCGTCG GCGGCGCGGT GATGGCGCTG
CACGGCGCGC AGGGGCCGCA GCTCGGTTTA CCGCAGATGA TCTCGAGCCG CGTACAGTTC
GGCGTCTACG GCGCGATGAT CCCGATCGTG CTCGTGTGCC TGATGTACAT CGGCTTTTCC
GCCAGCGGCT CGGTGCTTGC CGGGCAGGCC GTCGCGCAAC TGCTGCACGT CGACGACGCG
GCCGGCATCC TGCTGTTCGC GGCCGTGATC GTCGTGCTGA CGGTGTTCGG CTATCGCGCG
ATCCACTTCG TCGGCCGGAT CGCGAGCGTG GTCGGCATCA TCGCGTTCGT GTACATGTTC
GCGCAGCTGT TCGCGAACCA TGACGTCGGC GCGCTGCTCG CGAACAAGCA CTTCTCGCTC
GCGAGCTTCC TGCTGTCGAT GTCGCTGTCC GCGTCGTGGC AGATCGCGTT CGGCCCGTAC
GTCGCCGACT ATTCGCGCTA CCTGCCGCGC TCGACGTCGT CGGTCGCCAC GTTCCTCGCG
GTCGGCCTGG GCGCGGTGAT CGGCGCGCAG GCCGCAATGG TGTTCGGCGT GTTCGCGGCC
GCGCTGGCCG GCAACCAGTT CGCACACCAC GAGGTGTCGT ACATCGTCGG TCTCGGCTCG
ACGGGGGCCG TCGCCGCACT GCTGTACTTC AGCATCGCGT TCGGCAAGGT GACCGTGACC
ACGCTCAATG CCTACGGCAG TTTCATGTCG ATGGCGACGA TCGTCAGCGG CTTTCGCGGC
AAGCATGCGG TGTCGTCAAA GAGCCGTCTC GTCTACATCT TCGGGATGAT CTGCGTGTCG
ACGCTGATCG CGCTCGCCGG CCGTCATTCG TTCCTGAAGG AATTCACCGC GTTCATCCTG
TTCCTGCTCG CGTTCTTCAC GCCGTGGAGC GCGATCAACC TGGTCGACTA TTACTGCTTC
ACGCGCTCGC GCTACGACGT GCCGGCGCTG TCCGATCCGG ATGGCCGCTA CGGCCGCTGG
AACAGGATGG CGATCACGAT CTACGTGGTC GGCATCCTGG TGCAGTTGCC GTTCATGTCG
ACGCACATCT ACACGGGCGC GCTCGTCGAC GCACTCGGCG GCACCGACAT CTCGTGGATC
CTCGGCCTCA TCGTGCCGGC CGTGCTGTAC TACGTCGGTG CGCGTGCGTC GCGACGCAGC
ATCCCCGAGC GTCTGATCCT GCCGCTCGAG CGCGGCGAGG TTCAGCACTG A
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| Protein sequence | MSTNPSGKAG GLIEVRSIDF IPDAERHGGL LSQFTLWLSA NMQITAIVTG ALAVVLGGDV
FWSLVALLLG QLVGGAVMAL HGAQGPQLGL PQMISSRVQF GVYGAMIPIV LVCLMYIGFS
ASGSVLAGQA VAQLLHVDDA AGILLFAAVI VVLTVFGYRA IHFVGRIASV VGIIAFVYMF
AQLFANHDVG ALLANKHFSL ASFLLSMSLS ASWQIAFGPY VADYSRYLPR STSSVATFLA
VGLGAVIGAQ AAMVFGVFAA ALAGNQFAHH EVSYIVGLGS TGAVAALLYF SIAFGKVTVT
TLNAYGSFMS MATIVSGFRG KHAVSSKSRL VYIFGMICVS TLIALAGRHS FLKEFTAFIL
FLLAFFTPWS AINLVDYYCF TRSRYDVPAL SDPDGRYGRW NRMAITIYVV GILVQLPFMS
THIYTGALVD ALGGTDISWI LGLIVPAVLY YVGARASRRS IPERLILPLE RGEVQH
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