Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BamMC406_1133 |
Symbol | |
ID | 6177100 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia ambifaria MC40-6 |
Kingdom | Bacteria |
Replicon accession | NC_010551 |
Strand | + |
Start bp | 1255177 |
End bp | 1255803 |
Gene Length | 627 bp |
Protein Length | 208 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 641680889 |
Product | hypothetical protein |
Protein accession | YP_001807840 |
Protein GI | 172060188 |
COG category | [R] General function prediction only |
COG ID | [COG1853] Conserved protein/domain typically associated with flavoprotein oxygenases, DIM6/NTAB family |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 27 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 20 |
Fosmid unclonability p-value | 0.311037 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACCGACT CGACCCATCA CTATTACGAA CCCTCGCAAG GCCACGGCCT GCCGCACGAT CCGCTGAACG CGATCGTGGG CCCGCGCCCG ATCGGCTGGA TCTCTTCCCG CGGCAGCGAC GGCACGATCA ACCTCGCGCC GTACAGCTTC TTCAACGCAT TCAACTATCG TCCGCCGATC ATCGGCTTTT CGAGCACGGC CGCGAAGGAC AGCCTGCGCA ACGTGCAGGA GACCGGCGAG TTCGTCTGGA ACCTCGCGAC GCGCGATCTC GCCGACAGGA TGAACCAGAC CTGTGCGGCC GTGCCGTACG GCGTCGACGA ATTCGAACTC GGCGGCCTGA CCGCGATCCC GTCGCGCCTC GTGAATGTGC CGCGCGTCGC GGAAAGCGGC GTCAACTTCG AATGCAAGGT GACCGACGTG ATTCCGCTGC GCGATCACCA AGGCGTCGCC ACGCCGGCCA CGCTGGTGCT CGGCGAAGTC ATCGCGGTGC ACATTCGCCA CGACCTGCTG AAGGACGGCA TCTTCGACAC GTTCGGCGCG GGCATCATTC TTCGCGCGGG CGGCCCGTCG GCCTACGTGC ACGTCAGGTC CGACAGCCGC TTCGATATCG CGCGCCCCGA CGCGTAA
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Protein sequence | MTDSTHHYYE PSQGHGLPHD PLNAIVGPRP IGWISSRGSD GTINLAPYSF FNAFNYRPPI IGFSSTAAKD SLRNVQETGE FVWNLATRDL ADRMNQTCAA VPYGVDEFEL GGLTAIPSRL VNVPRVAESG VNFECKVTDV IPLRDHQGVA TPATLVLGEV IAVHIRHDLL KDGIFDTFGA GIILRAGGPS AYVHVRSDSR FDIARPDA
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