Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BamMC406_1126 |
Symbol | |
ID | 6177060 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia ambifaria MC40-6 |
Kingdom | Bacteria |
Replicon accession | NC_010551 |
Strand | + |
Start bp | 1246171 |
End bp | 1247253 |
Gene Length | 1083 bp |
Protein Length | 360 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 641680882 |
Product | exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase |
Protein accession | YP_001807833 |
Protein GI | 172060181 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG2148] Sugar transferases involved in lipopolysaccharide synthesis |
TIGRFAM ID | [TIGR03022] Undecaprenyl-phosphate galactose phosphotransferase, WbaP [TIGR03025] exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase |
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Plasmid Coverage information |
Num covering plasmid clones | 31 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 17 |
Fosmid unclonability p-value | 0.111628 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCCTGGAT ATTTCCACAG AGCGATCGAC GTCACGTTGA TCGTGTTGGG CGCGGTCGGA ACATCCCATG TCGGTATGGC CGATATCGGC AGTCCACCCC GACTGGATCC CTCGTTGGTC GCATTCGTCG CCGCGCTTGC GCTGTCGGTG TTCCCCGCTT GCGGCACCTA CTCGGCGCGA TGCACGAAGT CGCTCGCAAG CGCGATCAGC CGCACGACGC TCGCGTGGTT CGTCGTGCAG CTATGCGGCC TCGTATTGCT GTTCATGATT CATCGCAGCG CGCCGCCGTT GTTGCCGTGG TTCATCTACT GGACCCTGGT GAGCGGGATT TCGCTTCTCG TTTCACATAC GGCCGCCCTC GTTGCATTGT CTGTCGCGCG GCCGGCATGG CTCGGCCATT GGCAGACGGC ACATGGCTAC GGAATCGGCG GCGCCGCCCC GGCATCGGCC GGCGAAGCGC GCCCGTCCGT GCCGGCGCGG TACATCGTGA AGCGCTGTTT CGACGTGGTC GGCGGTGCGT TGCTGATCGT CGTGCTGTCG CCGCTGCTGA TCACGCTGAT GGTCGTCGTA TGGTGCGACG GCGGGCCGGC GTTCTACGGA CACGTTCGCG TCGGGCAGCA TGGCCGCAAA TTTCGCTGCA TGAAGTTCCG CTCGATGGTC GTGAACGCGG ACCAGATGCT CAAGCAGCTT CTGGACACGG ATCCTCAGGC TCGCGCCGAG TGGGAGAGTG GCTTCAAGCT CAAGAACGAT GTCCGCGTGA CACGTATCGG CCGCTTTCTG CGCCGCACGA GCCTGGACGA GCTGCCGCAG CTGTGGAACG TGATGCGCGG AGAGATGAGT CTGGTGGGGC CGCGGCCGAT CGTCGATGAA GAGCTTGCGC GTTACGGCGC CGACGTCAAG TACTACCTGC AGGTCAGGCC CGGCATGACG GGGCTTTGGC AGGTCAGCGG CCGCAGCAAT ACCGACTATG CGACGCGCGT GTCGCTGGAT GTGGACTATG TGAAGAACTG GTCGGTCCTT CGGGACGTGG TGATCCTGTT CAAGACGATC AAGGTGGTCG TCAAGGGCCA CGGCGCGTAC TGA
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Protein sequence | MPGYFHRAID VTLIVLGAVG TSHVGMADIG SPPRLDPSLV AFVAALALSV FPACGTYSAR CTKSLASAIS RTTLAWFVVQ LCGLVLLFMI HRSAPPLLPW FIYWTLVSGI SLLVSHTAAL VALSVARPAW LGHWQTAHGY GIGGAAPASA GEARPSVPAR YIVKRCFDVV GGALLIVVLS PLLITLMVVV WCDGGPAFYG HVRVGQHGRK FRCMKFRSMV VNADQMLKQL LDTDPQARAE WESGFKLKND VRVTRIGRFL RRTSLDELPQ LWNVMRGEMS LVGPRPIVDE ELARYGADVK YYLQVRPGMT GLWQVSGRSN TDYATRVSLD VDYVKNWSVL RDVVILFKTI KVVVKGHGAY
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