| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BamMC406_1122 |
|---|
| Symbol | |
|---|
| ID | 6176182 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia ambifaria MC40-6 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010551 |
|---|
| Strand | + |
|---|
| Start bp | 1239196 |
|---|
| End bp | 1241538 |
|---|
| Gene Length | 2343 bp |
|---|
| Protein Length | 780 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 641680878 |
|---|
| Product | exopolysaccharide tyrosine-protein kinase |
|---|
| Protein accession | YP_001807829 |
|---|
| Protein GI | 172060177 |
|---|
| COG category | [D] Cell cycle control, cell division, chromosome partitioning |
|---|
| COG ID | [COG0489] ATPases involved in chromosome partitioning |
|---|
| TIGRFAM ID | [TIGR01007] capsular exopolysaccharide family |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 24 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGATTGCCC GACAGCTTGA AATGGGGACG ATCGATGCCA GCGATGAAAC CGGCGGTTCG
TCTCCGAAGG AGATGATGCG TTTCGTCATC GACAATATCT GGACCGTCAT CCTCATCGCC
GCGGCGGTGA CGATAGCGGC GAGCCTTTAC TGCGTGTTCG CCACGCGCGT TTACTCCGCC
GATGCGGTTC TGCAGGTCGA TCGATCGAAT TCCGGCGGGC TGGGCATCGC TGCGCAGCCG
ACCGCGCAGA CCCAGCAGCC AGCCACGCCG ATGGCGCAGC TGAGCCAGAC CGAAATACAA
ATCATCCGCA GCCGCTCGGT GCTGACGCCG ATCATCGAGC AATACCGGTT GTTCGTGTCC
GTTACGCCGC GTACGGTGCC GGTGCTCGGC CAGATTGCCG AGCGATTTGC GACGCCCGGC
CATCTCGCCG CGCCCTGGCT GGGACTGAGC GACTACGGCT GGGGCGGAGA GCGAGCCGAT
ATTGCCGTCC TGGATGTGCC GGCCAGTCTC GAGAGCAAGG AACTGGAATT GATCGCGCTG
CAACATGGCG GCTATCGGCT TGCCGATCCG AATGGACGGG TGCTGGTGGA AGGGACGGTG
GGCAAGGAGG CGTCCGGCAA TGGCGTGCGG ATCCTGATTA CACAACTGGT GGCACGGTCG
GGGATGCGCT TCGGCGTCGT CCGTTATAAC GACATCGACG CCATGCAGCG CTTCTTGCGC
GATCTGCGGG TGAGCGAGCA GGGCGCGGAT ACCGGCCTCA TCAAGGTTTC CTACGAGAGT
GCCGACCCCG CGCGTGCCAC CGCGGTCGCC AACGATATCG CGCAGAACTA CATGGCCTCG
CATATTGCAT ACCGTCAGGA CGAGGCCACC CGGATGCTGG CCTTCGTCAA CGGCGAGCTG
CCGCGCCTGC GTACCGAGAT GAAGGAGGCG GAAGACAAGC TCACCAAGCA TCAGGCGACG
ACCGCTTCGC TGCAGCCGGC CAGCGAGAGC CAGGTCTACC TGCAAGGGAT CATGGACTTC
GACCGGCAGA TCGCGACGCT CTCGATTCAG CGCACGCAAA TGCTCGAGCG CTTCACGACG
GAGAGCGCCC AAGTCCGGAC TATCGATCAG CAGCTCGGCC AGCTCAACAT GGCGAAGCGC
AATTTCGAGG CCCGCTTTGC CAGCATGCCT GCCGCCGCGC GCCAGTCGGC CGATCTGACA
CGCGATGCGA AAGTGGCCGA GCAGATCTAC GTGGCAATGG TCGGCAAGGC AAACGAGTTG
TCGGTCACGC GTGCGGGCAC GATCGGCAAC GCGCACATTC TCGATGCCGC CGTGCGACCC
GCGGCGCCGA TCAAGCCGCA GAGCGCCTTC ATCATCCCCA TCGGCGGCGT GCTGGGGCTC
ATGTGCGGCG TGTTGTTCGT CACCGTTCCG CGCCGGTTCT CGTCGAAGAT CGAAGATCCG
GTTGCCGTGG AGCGGCGCTT CCGGCTATCC GGTCTGGGCG TGATCCCGTT CAGCGAAGAA
CAGGTCAGGC TTTCGCGTTG CCTGCAGCAG GTCGATGCAA TGCAACGCGA GCCGGAGTCG
TGCGGCGATG CGTCGGCTCC CCGGATTCCG GACGGACGTG CAGGCGTCCC GGATGAAGCC
GCGCCGCCGG TGTGCGACTT GCGCGCCACG CTGCTGGCGA TGCGGTGCCC TCAGGATGTC
TCGGTCGAGG CGCTGCGCTG CGTGCGCACC GCGGTCGTCA GCGAGATGGC GGAGTTGCCC
AGCAAGGTGC TGGTGATCAC GAGCCCGACG CCGTCGACCG GCAAGAGCTT CGTCGCGTCC
AACCTTGCCG TGCTCCTGGC GGAAACGGGC AGTCGGGTGC TGCTGATCGA CGCCGACTTG
CGGCGCGGCA ATCTCGCCGC TCGCTTCGGG CAGCCGCGCG CATGCGGTCT TGCCGATCTG
CTGGCCGGGC ACATCGAAGC ACGTCAGGCG ATTCGGCCGA TCATCGATGG CAGGTTGTCG
TTCATCTCGA CGGGGCCGTA TACCGCCAAT CCGTCGGTAT TGCTGTCGAC GCCGCGGATG
AACGAATTGC TGAACGAGTT CCGTGCCAGT TTCGACTTCG TCATCGTCGA TTCCCCGCCG
GTGCTGGCCG TCAGCGATGC GTCGATGGCA GCGGGCAGCG CCGACGCGAC GATTCTCGTG
CTGCGTGCAA ACGTGCAGAC CGAGCGCGAG ATCGAGGAAA CACTGAGCCG GCTCGAGCGG
GCAGGCGCGC GCGTGATCGG CCCGGTGTTC AATGCCGTCG CGATCCGACG CAGCGACAAG
CGCCTTTACC AATACACGAG CGCCTATATC GCCGACGAGC CGGCCAGGTG GCAAATCACG
TAA
|
|---|
| Protein sequence | MIARQLEMGT IDASDETGGS SPKEMMRFVI DNIWTVILIA AAVTIAASLY CVFATRVYSA
DAVLQVDRSN SGGLGIAAQP TAQTQQPATP MAQLSQTEIQ IIRSRSVLTP IIEQYRLFVS
VTPRTVPVLG QIAERFATPG HLAAPWLGLS DYGWGGERAD IAVLDVPASL ESKELELIAL
QHGGYRLADP NGRVLVEGTV GKEASGNGVR ILITQLVARS GMRFGVVRYN DIDAMQRFLR
DLRVSEQGAD TGLIKVSYES ADPARATAVA NDIAQNYMAS HIAYRQDEAT RMLAFVNGEL
PRLRTEMKEA EDKLTKHQAT TASLQPASES QVYLQGIMDF DRQIATLSIQ RTQMLERFTT
ESAQVRTIDQ QLGQLNMAKR NFEARFASMP AAARQSADLT RDAKVAEQIY VAMVGKANEL
SVTRAGTIGN AHILDAAVRP AAPIKPQSAF IIPIGGVLGL MCGVLFVTVP RRFSSKIEDP
VAVERRFRLS GLGVIPFSEE QVRLSRCLQQ VDAMQREPES CGDASAPRIP DGRAGVPDEA
APPVCDLRAT LLAMRCPQDV SVEALRCVRT AVVSEMAELP SKVLVITSPT PSTGKSFVAS
NLAVLLAETG SRVLLIDADL RRGNLAARFG QPRACGLADL LAGHIEARQA IRPIIDGRLS
FISTGPYTAN PSVLLSTPRM NELLNEFRAS FDFVIVDSPP VLAVSDASMA AGSADATILV
LRANVQTERE IEETLSRLER AGARVIGPVF NAVAIRRSDK RLYQYTSAYI ADEPARWQIT
|
|---|
| |