Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BamMC406_1111 |
Symbol | |
ID | 6177702 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia ambifaria MC40-6 |
Kingdom | Bacteria |
Replicon accession | NC_010551 |
Strand | - |
Start bp | 1225302 |
End bp | 1226501 |
Gene Length | 1200 bp |
Protein Length | 399 aa |
Translation table | 11 |
GC content | 72% |
IMG OID | 641680867 |
Product | major facilitator transporter |
Protein accession | YP_001807818 |
Protein GI | 172060166 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG2814] Arabinose efflux permease |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 27 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 26 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCCGCCG CCTCCACCGA CCGTCCGACC GACGCCGCCT CGCCCCACTA CTCGCGCAGC CTGCTGTTGC TGCTCGCGAC GATCGCGGGC GTGTCGGTCG CGAACATCTA CTACAACCAG CCGCTGCTCG ACAGCTTCCG CTCGGCCTTT CCCGACAGCG CGTCGTGGAT CGGCGCGGTG CCGACCGCGA CCCAGCTCGG CTATGCGGCC GGCATGTTCC TGCTCGCACC GCTCGGCGAC CGTTTCGATC GCCGCGGGCT GATCCTGCTG CAGATCGCGG GCCTGTCGAT CGCGCTGATC GTGGCCGCGG CCGCGCCATC GCTGGCGGTG CTCGCCGCGG CGAGCCTGGC GATCGGCGTG CTCGCGACGA TCGCGCAGCA GGCCGTGCCG TTCGCGGCCG AGATCGCGCC GCCCGCCGAG CGCGGGCATG CAGTCGGCAC CGTGATGAGC GGCCTGCTGC TCGGCATCCT GCTGGCGCGC ACGGCGGCCG GCTTCGTCGC CGAATATTTC GGCTGGCGGG CGGTATTCGG TGCATCGGTC GCAGCGCTCG CCGCGCTGGC CGCGGTGATC GTGCTGCGGC TGCCGCGCAG TTCGCCGACG TCGACGCTGT CGTACGGCAA GTTGCTCGGC TCGATGTGGC ATCTGGCGGT CGAACTGCGC GGGCTGCGCG AGGCGTCGCT GACGGGCGCC GCGCTGTTCG CCGCGTTCAG CGCGTTCTGG CCGGTGCTCA CGCTGCTGCT CGCCGGCGCG CCGTTCCATC TCGGCCCGCA GGCCGCCGGG CTGTTCGGCA TCGTCGGCGC GGCCGGTGCG CTGGCCGCGC CTTACGCGGG CCGTTTCGCC GACAAGCGCG GCCCGCGCGC GATCATCTCG CTCGCGATCG CGCTGCTCGC GGCGTCGTTC GTGATTTTTG CGCTGTCGGG GACGAGCCTC GTCGGGCTCG TGATCGGCGT GATCGTGCTG GATGTCGGGG TGCAGGCCGC GCAGATCTCG AACCAGTCGC GCATCTACGC GCTAAAGCCC GACGCGCGCA GTCGCGTGAA CACCGTGTAC ATGGTGTGCT ACTTCATCGG CGGCGCGCTC GGCTCGTCGG TCGGCGTCGC CGCATGGCAT GCATTCGGCT GGATCGGCAT GTGCGCGGCC GGCCTGCTGT TTACCGCACT CGCCGGCTGG TTCCACCATC GCGGCGCACA GCGCGCCTGA
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Protein sequence | MSAASTDRPT DAASPHYSRS LLLLLATIAG VSVANIYYNQ PLLDSFRSAF PDSASWIGAV PTATQLGYAA GMFLLAPLGD RFDRRGLILL QIAGLSIALI VAAAAPSLAV LAAASLAIGV LATIAQQAVP FAAEIAPPAE RGHAVGTVMS GLLLGILLAR TAAGFVAEYF GWRAVFGASV AALAALAAVI VLRLPRSSPT STLSYGKLLG SMWHLAVELR GLREASLTGA ALFAAFSAFW PVLTLLLAGA PFHLGPQAAG LFGIVGAAGA LAAPYAGRFA DKRGPRAIIS LAIALLAASF VIFALSGTSL VGLVIGVIVL DVGVQAAQIS NQSRIYALKP DARSRVNTVY MVCYFIGGAL GSSVGVAAWH AFGWIGMCAA GLLFTALAGW FHHRGAQRA
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