| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BamMC406_1053 |
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| Symbol | |
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| ID | 6179012 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria MC40-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010551 |
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| Strand | + |
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| Start bp | 1147642 |
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| End bp | 1149063 |
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| Gene Length | 1422 bp |
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| Protein Length | 473 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 641680809 |
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| Product | hopanoid biosynthesis associated radical SAM protein HpnJ |
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| Protein accession | YP_001807760 |
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| Protein GI | 172060108 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1032] Fe-S oxidoreductase |
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| TIGRFAM ID | [TIGR03471] hopanoid biosynthesis associated radical SAM protein HpnJ |
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 23 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAAACGC TGTTCTTGCA GGCCCCTTCG TATGACGGCT TCGACGGCGG AGCCGGCTCG
CGCTATCAGG CGAAGCGCGA AATCCGTTCC TTCTGGTACC CGACGTGGCT CGCGCAGCCG
GCCGCGCTCG TGCCGGGCAG CCGTGTCGTC GACGCACCGG CCGACGGGCT GTCGGTCGAC
GAGACGCTGA AAATCGCCAA CGACTACGAC CTCGTGATCA TCCACACGAG CACGCCGTCG
TTCCCGACCG ACGCGATGTT CGCGCAGGAC CTGAAGAAGA TGAAGCCGTC GATGCTGGTC
GGCATGGTGG GCGCGAAGGT GATGGTCGAT CCGCACAACT CGCTCACGGC GAGCGACGCA
ATCGACTTCG TGTGCCGCGA GGAATTCGAC TTCACCTGCA AGGAAATCGC TGAAGGCCGG
CCGTTCTCGC AGATCAAGGG CTTGAGCTGG CGCGCGAAGG ACGGCTCGAT CGAGCACAAC
GAAGCGCGTC CGATCCTCGA GAACATGGAC GAGCTGCCGT TCGTCGCGCC CGTCTACAAG
CGCGACCTGA AGATCGACAA CTACTTCATC GGCTACCTCA ACTATCCGTA CGTATCGATC
TACACGGGCC GCGGCTGCAA GTCGCGCTGC ACGTTCTGCC TGTGGCCGCA GACGGTCAGC
GGCCATCGCT ACCGCACGCG CTCGGTCGAG AACGTGCTCG CGGAAGCAAA GTGGATCCGC
GACAACATGC CGGAAGTGAA GGAACTGATG TTCGACGACG ACACCTTCAC CGACGACCTG
CCGCGCGCCG AAGCCATCGC CATCGGTCTG GGCAAGCTCG GCATGACGTG GTCGTGCAAC
GCGAAGGCGA ACGTGCCGTA CAAGACGCTG AAGGTCATGA AGGAGAACGG CCTGCGCCTG
CTGCTGGTCG GCTTCGAATC CGGCGACGAC CAGATCCTCG TGAACATCAA GAAGGGCGTG
CGCACCGATT TCGCGCGCCG CTTCAGCGCG GACTGCAAGA AGCTCGGCAT CAAGATCCAC
GGCACCTTCA TCCTCGGCCT GCCGGGCGAG ACGCAGGAAA CCATCAAGAA GACGATCGAG
TACGCGAAGG AAATCAATCC GCACACGATC CAGGTGTCGC TCGCCGCGCC GTATCCGGGC
ACGACGCTGT ACAAGCAGGC AGTCGAGAAC GGCTGGATGG AAGAGAACAA GACCATCAAC
CTGGTGAGCA AGGAAGGCGT GCAGCTCGCG GCGATCGGCT ATGCGCACCT GTCGCGCGAC
GAGATCTATC ACCAGCTCGA GCAGTTCTAT CGCCAGTTCT ACTTCCGTCC GTCGAAGATC
TGGGAGATCG TCCGCGAGAT GCTGACGAGC TGGGACATGA TGAAGCGCCG TCTGCGCGAA
GGCGTCGAGT TCTTCCGCTT CCTGCGCGCG CACGAGGCCT GA
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| Protein sequence | MKTLFLQAPS YDGFDGGAGS RYQAKREIRS FWYPTWLAQP AALVPGSRVV DAPADGLSVD
ETLKIANDYD LVIIHTSTPS FPTDAMFAQD LKKMKPSMLV GMVGAKVMVD PHNSLTASDA
IDFVCREEFD FTCKEIAEGR PFSQIKGLSW RAKDGSIEHN EARPILENMD ELPFVAPVYK
RDLKIDNYFI GYLNYPYVSI YTGRGCKSRC TFCLWPQTVS GHRYRTRSVE NVLAEAKWIR
DNMPEVKELM FDDDTFTDDL PRAEAIAIGL GKLGMTWSCN AKANVPYKTL KVMKENGLRL
LLVGFESGDD QILVNIKKGV RTDFARRFSA DCKKLGIKIH GTFILGLPGE TQETIKKTIE
YAKEINPHTI QVSLAAPYPG TTLYKQAVEN GWMEENKTIN LVSKEGVQLA AIGYAHLSRD
EIYHQLEQFY RQFYFRPSKI WEIVREMLTS WDMMKRRLRE GVEFFRFLRA HEA
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