| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BamMC406_1042 |
|---|
| Symbol | |
|---|
| ID | 6176103 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia ambifaria MC40-6 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010551 |
|---|
| Strand | + |
|---|
| Start bp | 1133062 |
|---|
| End bp | 1134126 |
|---|
| Gene Length | 1065 bp |
|---|
| Protein Length | 354 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 641680798 |
|---|
| Product | glycosyl transferase group 1 |
|---|
| Protein accession | YP_001807749 |
|---|
| Protein GI | 172060097 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG0438] Glycosyltransferase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 29 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 24 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCGAATCG CCCAAATCGC TCCGTTGCAT GAGGCAGTCC CCCCGAAGCT TTACGGTGGT
ACCGAGCGAG TGGTGTCCTA TCTGACCGAA GCACTTGTCG AGATGGGGCA TGACGTCACG
CTCTTCGCGA GCGGCGATTC GCAGACCTCC GCGAAGCTCG AAGCGTGCTG GCCGCAGGCG
CTGCGCCTCG ACCCGACGAT CCGCGACGTG ATGGCCCCGC ACATGCTGCT CCTCGAGCAG
GTGCGCCGCC GCGCGGAAGA GTTCGACGTC CTGCACTGCC ACATCGACTA CTACCCGTTC
TCGCTGTTCT CGCGCCAGCC GGTCCCGCAT CTGACGACGA TGCACGGCCG TCTCGACCTG
CCGGAACTGC AGCCGATCTT CAACGCGTTC AGCGACGTGC CGGTCGTGTC GATCTCCGAC
AACCAGCGCA TCCCGCTGCC GCAGGCGAAC TGGCTGTCGA CCGTGTACCA CGGCCTGCCG
GAAAACCTGC TGACGCCGAT CCCGAACGTG AAGCCGAGCT ATCTCGCGTT CCTTGGCCGC
ATCTCGCCGG AAAAGCGCGT CGATACCGCG ATCCGCATCG CCGAGCAGGC CGGCCTGCCG
ATCAAGATCG CCGCGAAGCT CGACAAGGCC GACCGCGCGT ACTACGAAGA GAAGATCAAG
CCGCTGTTCG CGCTCCCGCA CGTCGAGTAC ATCGGCGAAA TCAGCGAGTC GGAAAAGACC
GAATTCCTGG GCAACGCGCA CGCGCTGCTG TTCCCGATCG ACTGGCCGGA GCCGTTCGGC
CTGGTGATGA TCGAGGCGAT GGCCTGCGGC ACGCCGGTGA TCGCGTTCAA GCGCGGCTCG
GTGCCGGAAG TGATCGACAA CGGCGTGTCG GGCTTCGTCG TCGAAGACGA ACTCTCGGCC
GTCGCGGCGC TCAACCGCCT CGATACGCTG CCGCGCGAGA AGGTGCGGGC CGCGTTCGAA
GCGCGCTTCT CGTCGAAGGT GATGGCGCAG AACTACGTGA AGGGCTACGA GGAACTGCTG
CGCCAGAAGC GCCGCACGGT GCTGCGCGAA GTCAACGCCA ACTGA
|
|---|
| Protein sequence | MRIAQIAPLH EAVPPKLYGG TERVVSYLTE ALVEMGHDVT LFASGDSQTS AKLEACWPQA
LRLDPTIRDV MAPHMLLLEQ VRRRAEEFDV LHCHIDYYPF SLFSRQPVPH LTTMHGRLDL
PELQPIFNAF SDVPVVSISD NQRIPLPQAN WLSTVYHGLP ENLLTPIPNV KPSYLAFLGR
ISPEKRVDTA IRIAEQAGLP IKIAAKLDKA DRAYYEEKIK PLFALPHVEY IGEISESEKT
EFLGNAHALL FPIDWPEPFG LVMIEAMACG TPVIAFKRGS VPEVIDNGVS GFVVEDELSA
VAALNRLDTL PREKVRAAFE ARFSSKVMAQ NYVKGYEELL RQKRRTVLRE VNAN
|
|---|
| |