Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BamMC406_1036 |
Symbol | |
ID | 6176631 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia ambifaria MC40-6 |
Kingdom | Bacteria |
Replicon accession | NC_010551 |
Strand | - |
Start bp | 1126192 |
End bp | 1127064 |
Gene Length | 873 bp |
Protein Length | 290 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 641680792 |
Product | membrane protein |
Protein accession | YP_001807743 |
Protein GI | 172060091 |
COG category | [S] Function unknown |
COG ID | [COG3336] Predicted membrane protein |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 0.675997 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 21 |
Fosmid unclonability p-value | 0.424179 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAACGTCC TGTACTGGCT CGATCCGTGG GAACCGTCGC CGACCGTGGT CATCGCGGTG CTGACGGCAG CCGTGCTGTT CGCGCGCGGC GTGAAGAAGG CGAAGGTGTC GCCGCTGCGG CAGTTCTCGT TCTGGTTCGG GCTGACGGCG CTCTACATCG CGCTGCATAC GCGGCTCGAC TACTTCTTCG AGCATGAATT CTTCATGCAC CGCGCGCAGC ACCTCGTGCT GCATCATCTC GGGCCGTTCT TCATCGCACT GGCGTACCCG GGCGCGGCGA TCCGCGCGGG CATTCCGTTT CGCTGGCGGC AGCGCTTCGT GCGCCCCGCG CTCGCGTGGG CGCCCGTGCG CGCGACGCTC GACGTGGTGT TCCATCCGGT CGTCGCGGTC GTGCTGTTCG TCGGGCTGAT CTATTTCTGG CTGCTGTCGC CGATCCACTT CGTCGCGATG CTCGACTGGC GCCTGTATCG CGTGATGAAC TGGAGCATGG TGATCGACGG GCTGCTGTTC TGGTGGCTCG TCGTCGATCC GCGTCCCGCG CCGCCCGCGC GGCTGTCGCC GGGCCGCCGG GTCCTCATCG TCGTCGCGGC GATCCCGCCG CAGATCGCGC TCGGCGCGCT GATCTTCTTC ACGCCGCACG AGCTGTATCC GATCTATTCG ATCTGCGGAC GCGCGTTCAC GTGGCTCAGC CCGCTGCGTG ACCAGCAGAT CGGCGGCTTG CTGCTGTGGA TTCCGGGTTC GATGATGAGC GTGATCGGCG CGCTGATCGC GCTGCGGCAC TGGCTGCGGC TGTCCGCGCG CGGCCGTCTG ATCGACGAGC GCGCTGCTGC CCGGCGCGCG GAGCACCCGC CGGTGACGCG CGCCGCCCAC TGA
|
Protein sequence | MNVLYWLDPW EPSPTVVIAV LTAAVLFARG VKKAKVSPLR QFSFWFGLTA LYIALHTRLD YFFEHEFFMH RAQHLVLHHL GPFFIALAYP GAAIRAGIPF RWRQRFVRPA LAWAPVRATL DVVFHPVVAV VLFVGLIYFW LLSPIHFVAM LDWRLYRVMN WSMVIDGLLF WWLVVDPRPA PPARLSPGRR VLIVVAAIPP QIALGALIFF TPHELYPIYS ICGRAFTWLS PLRDQQIGGL LLWIPGSMMS VIGALIALRH WLRLSARGRL IDERAAARRA EHPPVTRAAH
|
| |