Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BamMC406_1033 |
Symbol | |
ID | 6177153 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia ambifaria MC40-6 |
Kingdom | Bacteria |
Replicon accession | NC_010551 |
Strand | - |
Start bp | 1123660 |
End bp | 1124577 |
Gene Length | 918 bp |
Protein Length | 305 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 641680789 |
Product | LysR family transcriptional regulator |
Protein accession | YP_001807740 |
Protein GI | 172060088 |
COG category | [K] Transcription |
COG ID | [COG0583] Transcriptional regulator |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 23 |
Fosmid unclonability p-value | 0.780318 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAACGATC AAGAACGGGA TCTGAACGAT CTCTATTACT TCGTGCAGGT GGTCGAGCAC GGCGGCTTCG CGCCGGCCGG GCGCGCGCTC AACCAGCCGA AATCGAAGCT GAGCCGCCGT ATCGCGCTGC TCGAGGCGCG GCTCGGGATG CGGCTGATTC ATCGCTCCAC GCGCCGTTTC ACCGTCACCG ACGTCGGCCA GACCTACTAC GCGCACTGTC GCGCGATGCT CGTCGAAGCC GACGCCGCCG ACGAAGCGAT CGCGCTGTTG CACGAGGAAC CGCGCGGCAT CGTGCGCGTG AGCTGCCCGG TCGTGCTGCT CGATTCGCTG GTCGGCACGA TGATCGCCGC GTTCATGGTC GCGTGCCCGC GCGTCGAGAT TCACCTGGAG GCGACCAACC GGCGCGTCGA CGTGGTCGGC GAAGGGATCG ACGTCGCGAT CCGCGTGCGC CCGCCGCCGC TCGAGGACAG CGATCTCGCG CTGCGTGTGC TGGCCGAGCG CGGCCAGTGC CTCGTCGCGA GCCCCGCGTT GCTGCGCGAG CTCGGCACGC CGGCCGTTCC CGCCGACCTG ACCCGCCTGC CGAGCCTCGA TCACGGCGTG CCGCAGGCCG CGCACGTATG GCGGCTGCGC GGCCCCGACG GCGCGCAGGC GGAAATCCAC CACCAGCCGC GCCTCGTGAC GGGCGGCATG CTCGCGCTGC GCGCGGCGGC CGTCGCGGGT GTCGGCGTCG TGCAGCTGCC GACGATGATG GTGCGCGACG AAGTCGCGCG CGGCGACCTG GTGACCGTGC TGCCGAACTG GGCGCCGCGG CGCGAGATCG TGCACGCGGT GTTCGCGTCG CGGCGCGGAC TGTTGCCCGC GGTGCGCTCG CTGCTCGACT TCCTGACCGA ACGGTTCGCC GAACTCGCAC CCGATTGA
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Protein sequence | MNDQERDLND LYYFVQVVEH GGFAPAGRAL NQPKSKLSRR IALLEARLGM RLIHRSTRRF TVTDVGQTYY AHCRAMLVEA DAADEAIALL HEEPRGIVRV SCPVVLLDSL VGTMIAAFMV ACPRVEIHLE ATNRRVDVVG EGIDVAIRVR PPPLEDSDLA LRVLAERGQC LVASPALLRE LGTPAVPADL TRLPSLDHGV PQAAHVWRLR GPDGAQAEIH HQPRLVTGGM LALRAAAVAG VGVVQLPTMM VRDEVARGDL VTVLPNWAPR REIVHAVFAS RRGLLPAVRS LLDFLTERFA ELAPD
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