| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BamMC406_1025 |
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| Symbol | |
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| ID | 6177036 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria MC40-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010551 |
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| Strand | + |
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| Start bp | 1117166 |
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| End bp | 1118644 |
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| Gene Length | 1479 bp |
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| Protein Length | 492 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 641680781 |
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| Product | diguanylate cyclase |
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| Protein accession | YP_001807732 |
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| Protein GI | 172060080 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG3706] Response regulator containing a CheY-like receiver domain and a GGDEF domain |
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| TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 27 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCATCGTC GTACGGCGGC CCCCTACGTC ATCGTGGCGG TTGGCATCGT GATCGCGTGC
GCACTGATGG GCCTGTGCGT GCTGCAGCTA TTTCAGAGCC GGAACGACGC ATTGGAGCGC
GCAAGCGAAA CCTCGCGCAA TCTCGGCCTG ATCGCCGAGC GCGACATCGA GCGCAACTTC
GAACTCTACG ACCTGTCGTT GCAGGCGGTG ATTCAGGGTC TGCAACGGCC TGATGTGATG
TCGGCAGCCC CGGCGCTGCG GCGCGGCGTG CTGTTCGATC ATGCCATGAG TGCACCCTTC
ATCGGTTCGC AACTGGTACT CGACGCGAAC GGCGATATCG TTCTGGATTC GGCCAACGAC
GTGCCCCGCA AGGGCAATTT CGCCGATCGC AAATACTTCA CCGTGCATCG CGATAATCCC
GACGTTGGAC TCTATGTGAG CGATCCGTTC GTGTCGCGCT TGCGCGCTGG CATGCTCTGC
ATTGTGCTGT CTCGGCGCAT CTCGAACCCG GACGGATCGT TCGGCGGCGT CGCGCTGATT
GCGATCAATC TCGAGTACTT CCACCAGCTG TTTGCGGGCC TGTCGCTGGG GCAGCACGGT
TCGATGTCGC TGATCGGCAA GGACGGCATC ATGGTGATGC GTCAACCGTA CAACGTCAGC
ATCGTCGGTC GCGATATCAG CAAGGCTGCG ACCTTTCGAC GATTTCAGCG TGCGTCGGAG
GGCGTATTCT CGGAGACAGC TTCAATCGAC GGTGTGCGTC GCCTCTACTA TTTCAAGCAC
CTGCCGAAGT TGCCGCTGAT CATCATGGTT GCAGAAGGCG AGCAGGACGT TTATGCCGCG
TGGCGGCACC GCGCGGTGAC GATCGGCGCA CTGGTGGCGA CGTTTGGCGT CGCGTTCATC
GCGCTGTCGT TCCTGCTCAG CGGGCAACTG CGCCGCCGGA TGCGGGCCGA ATCCGAGCTG
GTGCTGCTGG CGCGTACCGA CGGGCTCACC GGCCTGAACA ATCGCCGCAG TTTCGGGGAA
GTTCTGGATC GCGAATGGCG TCGCGCCAGG CGCACGCATT CCGTCTTCTC GCTGCTGTTC
GTGGACGTCG ATCGCTTCAA GGCTTACAAC GACACCTACG GGCATCAGGC CGGGGACGAC
GCGCTGGCGG CGGTCGCCCG CTGCATCGGC GAAAACATCC GCCGGCCGGT CGATACCGCG
GCGCGCTACG GCGGGGAGGA ATTCGTCGTG CTGCTTCCCG ATACGCCGCC GGCCGGCGCC
GCCCAGATCG CCGAGCGGAT TCGTGCGGCA ATCGACGAAC TGGCACTCGA ACATGCCGGC
AGCGAGTATG GGCGCGTCAC GGCCAGTATT GGCCTCGCCA GCTGGACGCC GGAGCAGGAC
AATGAGCCCG ACGCGGTAAT CAAGGCGGCC GACGAGGCGC TGTACTATGC GAAAACGATC
GGCCGGAACA GGGTTGCCGC GTTGCAGCCG TTGGACTGA
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| Protein sequence | MHRRTAAPYV IVAVGIVIAC ALMGLCVLQL FQSRNDALER ASETSRNLGL IAERDIERNF
ELYDLSLQAV IQGLQRPDVM SAAPALRRGV LFDHAMSAPF IGSQLVLDAN GDIVLDSAND
VPRKGNFADR KYFTVHRDNP DVGLYVSDPF VSRLRAGMLC IVLSRRISNP DGSFGGVALI
AINLEYFHQL FAGLSLGQHG SMSLIGKDGI MVMRQPYNVS IVGRDISKAA TFRRFQRASE
GVFSETASID GVRRLYYFKH LPKLPLIIMV AEGEQDVYAA WRHRAVTIGA LVATFGVAFI
ALSFLLSGQL RRRMRAESEL VLLARTDGLT GLNNRRSFGE VLDREWRRAR RTHSVFSLLF
VDVDRFKAYN DTYGHQAGDD ALAAVARCIG ENIRRPVDTA ARYGGEEFVV LLPDTPPAGA
AQIAERIRAA IDELALEHAG SEYGRVTASI GLASWTPEQD NEPDAVIKAA DEALYYAKTI
GRNRVAALQP LD
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