| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BamMC406_0995 |
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| Symbol | |
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| ID | 6176171 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria MC40-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010551 |
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| Strand | + |
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| Start bp | 1087207 |
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| End bp | 1088199 |
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| Gene Length | 993 bp |
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| Protein Length | 330 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 641680747 |
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| Product | peptidase S49 |
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| Protein accession | YP_001807702 |
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| Protein GI | 172060050 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG0616] Periplasmic serine proteases (ClpP class) |
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| TIGRFAM ID | [TIGR00706] signal peptide peptidase SppA, 36K type |
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Plasmid Coverage information |
| Num covering plasmid clones | 30 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 31 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCCGACC AACCGAATAT CCCTGATTCC TCGTCCCGTC CCGACAGCCG CGAGCCGAAC
TGGGAGCGCG CGGCGCTCGA GCGGATCGCG CTCGCGGCCG TCAAGGAACA GCGCGCGGCG
CGGCGCTGGA AGATCTTCTT CCGCTTCGCG TTCCTCGGCG TGTTCCTGCT GCTCGCCTTC
GCGCTGATCG ATTTCTCGGA CGACGCGAAG TTCGCGTCGA CCGGGCGCCA CACGGCGCTC
GTGACGATCG ACGGCGAGAT CGCGGCAGGC ACCAACGCGA ACGCGGAGGA CATCAATACG
GCGCTCGATG CCGCGTTCGA CGACGACGGC GCGGCCGGCG TCGTGCTGCG GATCAACAGC
CCGGGCGGCA GCCCGGTGCA GGCCGGGATG GTCTACGACG AGATTCGCCG GCTGCGCACG
AAATATCCCA ACAAGCCGCT GTACGTCGTC GTGACCGACA TGTGCGCATC GGGCGGTTAT
TACATTGCGT CCGCCGCCGA CAAGATCTTC GTCGACAAGG CGAGCATCGT CGGCTCGATC
GGCGTGCTGA TGGACGGGTT CGGCTTCACG GGCCTGATGG GCAAGCTCGG CGTCGATCGC
CGTCTGCACA CGTCGGGCGA AAACAAGGGC TTCTACGATC CATTCTCGCC CGAGACGCCG
AAGATGGACG CCCATGCGCA GGCGCTGCTC GACCAGGTCC ATGCGCAGTT CATCAAGGCC
GTGAAGGACG GTCGCGGCAA GCGGCTGCAC GAAACGCCCG ACATGTTCTC GGGTCTGTTC
TGGACGGGCG AGAAGAGCGT CGAGCTCGGG CTCGCCGACG GCTACGGCAC GACCGATACG
GTCGCGCGCG ACGTGCTGAA GGCGCCGGAT CTCGTCGACT ACACGGTGAA GGAAAGCCTG
ACGAACCGCG TCGCGCGCAA GTTCGGCGCG GCGGTCGGCG GTGCCGCGAT GAAGGCGCTC
GCCGCCGGCG GCACGTCGTT CAGCCTGCGC TGA
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| Protein sequence | MADQPNIPDS SSRPDSREPN WERAALERIA LAAVKEQRAA RRWKIFFRFA FLGVFLLLAF
ALIDFSDDAK FASTGRHTAL VTIDGEIAAG TNANAEDINT ALDAAFDDDG AAGVVLRINS
PGGSPVQAGM VYDEIRRLRT KYPNKPLYVV VTDMCASGGY YIASAADKIF VDKASIVGSI
GVLMDGFGFT GLMGKLGVDR RLHTSGENKG FYDPFSPETP KMDAHAQALL DQVHAQFIKA
VKDGRGKRLH ETPDMFSGLF WTGEKSVELG LADGYGTTDT VARDVLKAPD LVDYTVKESL
TNRVARKFGA AVGGAAMKAL AAGGTSFSLR
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