Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BamMC406_0990 |
Symbol | |
ID | 6178558 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia ambifaria MC40-6 |
Kingdom | Bacteria |
Replicon accession | NC_010551 |
Strand | + |
Start bp | 1079845 |
End bp | 1081167 |
Gene Length | 1323 bp |
Protein Length | 440 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 641680742 |
Product | transposase IS4 family protein |
Protein accession | YP_001807697 |
Protein GI | 172060045 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.0133097 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 25 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGCTAAGCG ACCACCTGAC CTTCCTGTTG GATGCAGCGC CCGCCGACCT AAGTCGGCTG GGCGAGCATC TGCCGCAGGA GTGGATCGAG CAGGCCATTG ATGCCACGGG CACGGCCAGC ATTCGTCGCC GGCGCTTACC GGCCGAACAA GTCGTGTGGC TGGTCATCGC GCTGGCGATC TACCGCCATT GGTCCATCAG TGAGGTGGTC GACAGCCTGG ATCTGGTGTT GCCCAACGAA GCGACGTTCG TCAGCAAGAG CGCCATCGCT CAGGCTCGGC AGCGATTGGG TGATGCGCCC ATGGCGTGGT TGTTCGAGCG AACCGCGCAA GCCTGGTGCC AGCAAGACGC GGCACGCCAC GCCTTCAAGG GGTTGAGCTT GTGGGCCATG GATGGCACCA CGCTACGCAC GCCAGACAGT CCGGCGAATC GCGAACACTT CGGCGCTCAG GGCTATGCCA GCGGCAAGGT GGCGAGCTAT CCGCAGGTGC GAGCTGTGAC CCTGACCTCG CTTGCGACTC ACCTCGTTGC AAACATTGCG TTTGGTCGCT ACGACACGAA TGAGATGCTG TATGCCAAGC AATTGCTGGA ACAGATTCCG GATCATTCGC TGACGGTCTT CGACAAGGGT TTTCTATCCG CCGAGATCCT GTGTGGCCTG AGCGCAGGCG AACGTAATCG CCACTTCCTG ATTCCTGCCA AATCCAATAC GCGCTGGGAA GTCGTGTCTG GCAAATCCGA GGATGCCTTG GTGCGAATGC GTGTTTCACC GCAGGCGCGG CAGAAGTGCC CGGAGTTGCC TGAATGGTGG ATGGCTCGCG CGATTCGTGT GCTTGATGCG GCAGGCCGTG AGCGGGTGCT GCTGACTTCG CTGACCGATC GACGTCGATT CAAGGTGGCG GATTTGAATG CCTGCTACGA ACGTCGCTGG CAGGTTGAAA CCAGCTATCG CGAGCTCAAG CAATCCATGC TTGGCAGCGC ACTGACGCTA CGCAGCCGGA CTGTCGAAGG CCTTTATCAG GAAATCTGGG GCGCTTTGAT CGCCTACAAC CTGATCCGTC GCGAAATGGC CAGCGCTGCC TTCGAGGCCA AGTGCGAGCC GACCGAACTC AGTTTCGTGC GCTCCTTCCA CCTTATCCAG CACGAGATGA TGTGGGCCGC GCGTACGCCA GCGTTGGCAA AGCTTCCCGC CGTTCTGAAA CGACTACGTG AGCACCTCAA ACTGCTCATC AACGTAAAAC GGCCCGATCG CAAATGCGAT CGGGCCGTCA AATCCCGTCC GGCTCGTTAT GCCGTTCGAT ATCTTCGGAA AGACCTTAAC TGA
|
Protein sequence | MLSDHLTFLL DAAPADLSRL GEHLPQEWIE QAIDATGTAS IRRRRLPAEQ VVWLVIALAI YRHWSISEVV DSLDLVLPNE ATFVSKSAIA QARQRLGDAP MAWLFERTAQ AWCQQDAARH AFKGLSLWAM DGTTLRTPDS PANREHFGAQ GYASGKVASY PQVRAVTLTS LATHLVANIA FGRYDTNEML YAKQLLEQIP DHSLTVFDKG FLSAEILCGL SAGERNRHFL IPAKSNTRWE VVSGKSEDAL VRMRVSPQAR QKCPELPEWW MARAIRVLDA AGRERVLLTS LTDRRRFKVA DLNACYERRW QVETSYRELK QSMLGSALTL RSRTVEGLYQ EIWGALIAYN LIRREMASAA FEAKCEPTEL SFVRSFHLIQ HEMMWAARTP ALAKLPAVLK RLREHLKLLI NVKRPDRKCD RAVKSRPARY AVRYLRKDLN
|
| |