| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BamMC406_0975 |
|---|
| Symbol | |
|---|
| ID | 6179027 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia ambifaria MC40-6 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010551 |
|---|
| Strand | - |
|---|
| Start bp | 1065890 |
|---|
| End bp | 1066228 |
|---|
| Gene Length | 339 bp |
|---|
| Protein Length | 112 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 641680725 |
|---|
| Product | branched-chain amino acid transport |
|---|
| Protein accession | YP_001807682 |
|---|
| Protein GI | 172060030 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG4392] Predicted membrane protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 0.00167089 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 26 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGAGCTACG CGCTGCTGAT TCTCGGGATG GCCGCGATCA CCTATGCGAT CCGGACGACA
CTGTTCCTGT TCGGCGAGCG GCTGACCTTC CCGCCGCTCG TGCGGACCGC GCTCGGCTTC
GTGCCCGTCA CCGTGCTGAC CGCGATCATC GTGCCGATGA CCGTCTCCCC GCACGGCGGC
ACGGCCGAGC TGACGTGGCG CAATCCGCAG CTCGTCGGCG CACTCGCCGC GGTGCTGGTG
TCGGCGACGA CGCGCCGGCC GCTCGTAACG ATCGCCGTCG GGCTCGCGGT GTTCTTCTTC
TGGCAAGGGA TCGTGATGCC GCACTGGCTG CCGGCCTGA
|
|---|
| Protein sequence | MSYALLILGM AAITYAIRTT LFLFGERLTF PPLVRTALGF VPVTVLTAII VPMTVSPHGG
TAELTWRNPQ LVGALAAVLV SATTRRPLVT IAVGLAVFFF WQGIVMPHWL PA
|
|---|
| |