Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BamMC406_0948 |
Symbol | |
ID | 6177366 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia ambifaria MC40-6 |
Kingdom | Bacteria |
Replicon accession | NC_010551 |
Strand | - |
Start bp | 1040621 |
End bp | 1041760 |
Gene Length | 1140 bp |
Protein Length | 379 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 641680698 |
Product | glucose/sorbosone dehydrogenase-like protein |
Protein accession | YP_001807655 |
Protein GI | 172060003 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG2133] Glucose/sorbosone dehydrogenases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 0.168955 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 30 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCCGCTAT TTCGCGCCGC CCTGGCGTAC CGCGCGCAGC ATCGCCTCAC GGGCCTGCTG ACCGGTTTCG TCATCTGCCT CGCAGCCACC GCGGCGTGCG CCGCGCCGCC GGTGGGCGAA CTCGTCGTGC CGCCCGGCTT CCACGTCGAC ATACTGACCG ACGCCGTGCC GACCGCCCGC GAAATGGCGT GGTCGCCGCG TGGGATTCTG TATGTCGGCT CGCGGGAAGG CCGCGTGCAT GCGTTCGCGA TGCACGAGGG CCGGATCACT GCCCGCTACA TGATCGCTTC GGGCCTCGAC ATGCCCGTCG GCGTCGCGTA TCGGGACGGC GCGCTCTATA TCTCCGCGGT GTCGCGCATC CTGCGCCTCG ACCACATCGA CGACCGGCTC GCCCGGCCGC CCGTGCCGGC GGTCGTGACG GACGCGCTGC CGACCGATCA TCATCACGGC TGGAAATTCA TCGCGTTCGG CCCCGACGGC AAGCTCTACG TGCCGACCGG CGCGCCGTGC AACGTGTGCC TGGCCGATCG CAGCCGCTAC GCGATCATCG CACGCATGAA CGCCGACGGC AGCGGCCGCG AGGTGTTCGC CCGCGGCGTG CGCAATACCG TCGGCTTCGC ATGGCACCCG GACTCGGGCG AGCTGTGGTT CACCGACAAC GGGCGCGACC TGATGGGCGA CGACGTACCC GACGACGAGC TGAACCGCGC GCCGCGCTCA GGCCTCGACT TCGGTTTTCC ATACTGTCAT GGCGGCGACA CGCCCGACCC CGAATTCGGG AGCGCCGACG CGTGCCGCCG CCATGTGCCG CCCGTGCTGA AACTCGGCGC GCACGTCGCC GCACTCGGCA TGCGCTTCTA TACGGGGCCG ATGTTCCCGG CGTCCTATCG CAACAATGTG TTCATTGCCG AGCACGGTTC GTGGAACCGC AGCACGAAGG TCGGCTACCG CGTGATGCGC GCGGTCGTGT CGGCCGACGG CAGCCACGCG CGCCAGACGC CGTTCATCAC CGGCTGGTTG CGCGCGGACG GCACCGTGTG GGGACGCCCG GCCGACGTGC TGCCGCTGCC GGACGGCTCG CTGCTCGTCA GCGACGACTA TGCAGGCGCC ATCTACCGCG TCACATATGC GGCACCTTGA
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Protein sequence | MPLFRAALAY RAQHRLTGLL TGFVICLAAT AACAAPPVGE LVVPPGFHVD ILTDAVPTAR EMAWSPRGIL YVGSREGRVH AFAMHEGRIT ARYMIASGLD MPVGVAYRDG ALYISAVSRI LRLDHIDDRL ARPPVPAVVT DALPTDHHHG WKFIAFGPDG KLYVPTGAPC NVCLADRSRY AIIARMNADG SGREVFARGV RNTVGFAWHP DSGELWFTDN GRDLMGDDVP DDELNRAPRS GLDFGFPYCH GGDTPDPEFG SADACRRHVP PVLKLGAHVA ALGMRFYTGP MFPASYRNNV FIAEHGSWNR STKVGYRVMR AVVSADGSHA RQTPFITGWL RADGTVWGRP ADVLPLPDGS LLVSDDYAGA IYRVTYAAP
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