| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BamMC406_0944 |
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| Symbol | |
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| ID | 6176299 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria MC40-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010551 |
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| Strand | - |
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| Start bp | 1036824 |
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| End bp | 1038110 |
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| Gene Length | 1287 bp |
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| Protein Length | 428 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 641680694 |
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| Product | D-amino acid dehydrogenase small subunit |
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| Protein accession | YP_001807651 |
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| Protein GI | 172059999 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0665] Glycine/D-amino acid oxidases (deaminating) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 0.972933 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 26 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGAGTCG TCGTTCTGGG CAGCGGTGTG GTGGGCGTGG CAAGCGCGTA TTACCTCGCG
CGCGCCGGTC ATGAAGTCAC GGTGATCGAC CGCGAGGCCG GCCCGGCGCT CGAGACGAGC
TTCGCGAACG CAGGCCAGAT CTCGCCCGGC TACGCGGCTC CGTGGGCCGC GCCCGGCGTG
CCGCTAAAGG CCGTCAAGTG GATGTTCGAG AAGCATGCGC CGCTCGCGAT CCGCCTCGAT
GGCACGCGCT TCCAGCTCCA GTGGATGTGG CAGATGCTGC GCAACTGCAC GGCCGATCGC
TATGCAGTCA ACAAGGGCCG CATGGTCCGC CTCGCCGAAT ACAGTCGCGA TTGCCTGCAG
GCGCTGCGCG CCGATACCGG CATCCAGTAC GAAGGGCGAA CGGGCGGCAC GCTGCAACTG
TTCCGCACGC AACAGCAACT CGACGGCGCG GCGAAGGACA TCGCGGTGCT GCAGGAAGCA
AACGTGCCGT TCGAACTGCT GTCGCCGGCC GAGTTGAAGA ACGCCGAACC GGCGCTCGCC
GCCGTGTCGC ACAAGCTGAC GGGCGGCCTG CGCCTGCCGG GCGACGAGAC GGGCGACTGC
CAGCTGTTCA CGACGCGCCT CGCAGCGCTC GCGGAATCGC TCGGCGTGAA GTTCCGTTAC
AACACGCCGA TCGACGCGCT CGCGATCGCG GGCGGCAGGA TCGCCGGCGT GCAGTGCGGC
AGCGAGACGG TGCGTGCGGA TGCGTATGTC GTCGCGCTCG GCTCGTACTC GACCAGCTTC
ATCTCGAACC TGATGAAGAT CCCGGTCTAT CCGCTGAAGG GCTATTCGAT CACCGCGCCG
ATCGTCAACG ATGCGGCGGC CCCCGTATCG ACGGTGCTCG ACGAAACCTA CAAGATCGCC
ATCACGCGTT TCGACCAGCG CATCCGCGTC GGCGGCATGG CCGAGATCGT CGGCTTCGAC
AAGAACCTGC GCGCCGCGCG CCGCGAAACG CTCGAAATGT GCGTGAACGA CCTGTTCCCT
GGCGGCGGCG ATACGTCGAA GGCAACGTTC TGGACGGGCC TGCGCCCGAT GACGCCGGAC
GGCACGCCGA TCGTCGGCCG CACGCCGGTC TCGAACCTGT TCCTGAACAC CGGCCACGGC
ACGCTCGGCT GGACGATGTC GTGCGGGTCG GGCCAGTTGC TCGCCGACCT GATCTCCGGC
AAGAAGCCGG CGATTCAGGC CGACGACCTG TCGGTGCATC GCTACCTGAA GGACGTGGCC
GGCCAGACGC GCCCGGCATA CGCGTAA
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| Protein sequence | MRVVVLGSGV VGVASAYYLA RAGHEVTVID REAGPALETS FANAGQISPG YAAPWAAPGV
PLKAVKWMFE KHAPLAIRLD GTRFQLQWMW QMLRNCTADR YAVNKGRMVR LAEYSRDCLQ
ALRADTGIQY EGRTGGTLQL FRTQQQLDGA AKDIAVLQEA NVPFELLSPA ELKNAEPALA
AVSHKLTGGL RLPGDETGDC QLFTTRLAAL AESLGVKFRY NTPIDALAIA GGRIAGVQCG
SETVRADAYV VALGSYSTSF ISNLMKIPVY PLKGYSITAP IVNDAAAPVS TVLDETYKIA
ITRFDQRIRV GGMAEIVGFD KNLRAARRET LEMCVNDLFP GGGDTSKATF WTGLRPMTPD
GTPIVGRTPV SNLFLNTGHG TLGWTMSCGS GQLLADLISG KKPAIQADDL SVHRYLKDVA
GQTRPAYA
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