| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BamMC406_0930 |
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| Symbol | |
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| ID | 6176294 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria MC40-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010551 |
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| Strand | + |
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| Start bp | 1022342 |
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| End bp | 1023514 |
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| Gene Length | 1173 bp |
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| Protein Length | 390 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 641680680 |
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| Product | tetratricopeptide repeat protein |
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| Protein accession | YP_001807637 |
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| Protein GI | 172059985 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2956] Predicted N-acetylglucosaminyl transferase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 0.583178 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 24 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGATCTGG ATTTCTGGTG GTTGCTCGCA ATTCCGGTGG CGTTCGCGCT CGGCTGGGCG
GCGTCACGCT ATGACCTGAA GAACCTCCTG TCGGAGAGCG CCAACCTGCC GCGCTCGTAT
TTCCGCGGCC TGAACTTTCT GTTGAACGAA CAACCGGACA AGGCGATCGA CGCGTTCATC
GAGGTCGCGA AGCTCGACCC GGAGACGGTC GAACTGCACT TCGCGCTCGG CAACCTGTTT
CGCCGCCGCG GCGAAACGGA CCGGGCGATC CGCGTGCACC AGAATCTGCT GAGTCGCACG
GACCTGCCGG TGAACGAGCG CGACCACGCG CTGTATGAAC TCGGCCAGGA TTTTCTGAAA
GCCGGCCTGC TAGATCGTGC CGAAGAGGCC TTCCACCGGC TCGCCGACGG CGACTACGCG
CTGGGTGCGC AGCGCGCGCT GCTGACGATC TACGAGATCG AGAAGGACTG GAACAAGTCG
ATCGATACCG CGAAGCGGAT CGAGTCGATG AGCGACAAGC CGCTCGCCAT CGAAATCGCG
CAGTTCCACT GCGAACTCGC GCAGGACGCG CTGCAGCGCA AGAGCGCCGC GGCAGCGGCC
GAACAGCTGA AGCTCGCGCT TGCCGCGAAC CCGCAGAACG TGCGCGCGAC GATATTGTCG
GGCGATGCCG CGGCGGCGGC GGCCGATCAC GCGGCCGCGA TCGAGCACTG GAAGCGCGTC
GAAGCGCAGA ATCCGGCTTA TCTGCCGCTC GTCGCCGACA AGCTGATGAA GGCCTATGTC
GCGCTCGGCC AGCCGGTCGA GGGCGCCGAG CTGCTGATGG GCTATGTCGA GCGCTATCCG
TCGAACGATC TGCTCGAAAT CGCGTATCAG CACATCGCCG GGTTGCGCGG CCAGGAGGCC
GCGCATACGC TCGCACGCAC GCAGATGGAG AAGTCGCCGA ACCTGTCCGG CATGCTGCAC
CTGCTCGACG CGCAGATCGC GGCCGCCGAC GAGCCGCGCC GTAAGGAACT TGAAATGATG
CGCGCGCTGA TCAAGCAGCG CACCAAAAAT CTGCCACGCT ATACGTGCCA GAATTGCGGT
TTCCGGGCAC GGCTCTTCTA CTGGCAGTGC CCCGGCTGCA GCGGCTGGGA AACCTATGCG
CTGCGCCGCG TCGAACCTGC GATGCCGGGC TGA
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| Protein sequence | MDLDFWWLLA IPVAFALGWA ASRYDLKNLL SESANLPRSY FRGLNFLLNE QPDKAIDAFI
EVAKLDPETV ELHFALGNLF RRRGETDRAI RVHQNLLSRT DLPVNERDHA LYELGQDFLK
AGLLDRAEEA FHRLADGDYA LGAQRALLTI YEIEKDWNKS IDTAKRIESM SDKPLAIEIA
QFHCELAQDA LQRKSAAAAA EQLKLALAAN PQNVRATILS GDAAAAAADH AAAIEHWKRV
EAQNPAYLPL VADKLMKAYV ALGQPVEGAE LLMGYVERYP SNDLLEIAYQ HIAGLRGQEA
AHTLARTQME KSPNLSGMLH LLDAQIAAAD EPRRKELEMM RALIKQRTKN LPRYTCQNCG
FRARLFYWQC PGCSGWETYA LRRVEPAMPG
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