| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BamMC406_0917 |
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| Symbol | |
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| ID | 6176254 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria MC40-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010551 |
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| Strand | - |
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| Start bp | 1008016 |
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| End bp | 1008732 |
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| Gene Length | 717 bp |
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| Protein Length | 238 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 641680667 |
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| Product | phosphoglycolate phosphatase |
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| Protein accession | YP_001807624 |
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| Protein GI | 172059972 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0546] Predicted phosphatases |
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| TIGRFAM ID | [TIGR01449] 2-phosphoglycolate phosphatase, prokaryotic
[TIGR01509] haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED
[TIGR01549] haloacid dehalogenase superfamily, subfamily IA, variant 1 with third motif having Dx(3-4)D or Dx(3-4)E |
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Plasmid Coverage information |
| Num covering plasmid clones | 29 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 0.0326596 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACGACTC CCCTTTCGAC CGGGCGGGCC GCGCTCGACG AGCCGCGCCT GCTGCACTGC
GCTGCGGTGC TATTCGACCT CGATGGCACG CTCGCCGACA CGGCGCCCGA TCTCGCCGCT
GCCGTCAACA AGATGCAGCG CGTGCGCGGC CTGCCCGAAA CACCGCTCGA TGTACTGCGC
CCGCTGGCAT CGGCCGGTGC GCGCGGCCTG CTCGGCGGCG CGTTCGGCAT CGCCCCCCAA
TCGCCCGGCT ACGACGCGAT GCGCGACGAG TTCCTGGCCA ATTACGCGAC GGACATCTGC
GTGCACACGA CGCTGTTCCC CGGCATCGGC GACGTGCTCG ACGAACTCGA TTCACGCGGC
GTGCGCTGGG GCATCGTCAC GAACAAGGTG ATGCGCCTCA CCGCACCGCT CGCCGACCTG
CTCGGGCTGG CGCCACGCGC GGCCTGCATC GTCGGGGGCG ACACAACGCC GCACTCGAAA
CCGCATCCGG CCCCGCTGCT GCATGCGGCC GAACAAATGA CGCTCGCGCC GGAACGCATC
GTCTACGTCG GCGACGATCT TCGCGACATC CAGGCCGGCA GCGCGGCAGG CATGGCGACG
GTCGCGGCCG CCTATGGTTA TTGCGGCGAC GGCGCTGCGC CGGCCGACTG GCAGGCGCAG
CATCTCGTCG GCTCGACGCA GGAACTACGC GAACTGCTGC GCGATGTTGG GCTATAA
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| Protein sequence | MTTPLSTGRA ALDEPRLLHC AAVLFDLDGT LADTAPDLAA AVNKMQRVRG LPETPLDVLR
PLASAGARGL LGGAFGIAPQ SPGYDAMRDE FLANYATDIC VHTTLFPGIG DVLDELDSRG
VRWGIVTNKV MRLTAPLADL LGLAPRAACI VGGDTTPHSK PHPAPLLHAA EQMTLAPERI
VYVGDDLRDI QAGSAAGMAT VAAAYGYCGD GAAPADWQAQ HLVGSTQELR ELLRDVGL
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