| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BamMC406_0878 |
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| Symbol | |
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| ID | 6176251 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria MC40-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010551 |
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| Strand | + |
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| Start bp | 965836 |
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| End bp | 966963 |
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| Gene Length | 1128 bp |
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| Protein Length | 375 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 641680627 |
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| Product | DNA polymerase III, epsilon subunit |
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| Protein accession | YP_001807585 |
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| Protein GI | 172059933 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0847] DNA polymerase III, epsilon subunit and related 3'-5' exonucleases |
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| TIGRFAM ID | [TIGR00573] exonuclease, DNA polymerase III, epsilon subunit family |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 0.628504 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 36 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCCGATT CCCGTCCGTC CGATCCCGCC TGCGAGCACC CGCTCGTCTT CGTCGACCTT
GAAACCACCG GCGGCTCGAC CGCCGAGCAC CGCATCACCG AAATCGGCGT GGTCGAAATC
GGCCCGCTCG GCGTGTCGAC GTGGACGACG CTGGTCAACC CGGGACAGTC GATTCCGCCG
TTCATCCAGC AATTGACCGG CATTTCGGAC GACATGGTGC GCGACGCGCC GTCGTTCGCG
TCGCTCGCGC CCACGCTGTT CGAGCGGCTC GACGGCAAGC TGTTCGTCGC GCACAACGCG
AGCTTCGACC GCGGTTTCCT GCGCGCCGAA TTCGAACGTG CCGGCATCGC GTTCAATCCG
GACGTGCTGT GTACGGTGCG GCTGTCGCGC GCGCTGTTTC CGCGCGAGGC GCGGCACGGA
CTCGATGCTT TGATCGAGCG GCATGGCCTT GTTCCCGCGG CCCGCCACCG GGCGCTCGCG
GATGCCGATC TCCTTTGGCA GTTCTGGCGG CAGTTGCACG AGATCGTGCC GCTCGAGCGT
CTGCGCGACC AGATTGCGCG TACGACCCGC CACTTCCGTC TCGCGGGCGG CATGACCGAA
GCGTGGCTTG ATACCGCGCC CGCCGGATGC GGTGTGTACG CGCTGTTCGG GGAGGGCGAC
GAAGCCCTTT ACGTCGGGCG CAGTGTGCGG GTGCGGCAGC GCTTGCGCGC GTTGCTGACC
GGCGAGCGGC GCTCGTCGAA GGAAATGCGG CTCGCGCAGC AGGTGCGGCG AGTCGAATGG
CGGGAGACCG GCAACGAGCT GGGCGCGATG CTCGCCGAAG CGCAGTGGAT CGCCCGCCTG
CGTCCGTCGC ACAACCGGCG TCCCGCGGCC GATAAAGCCC GTGCGGGCAA TGCGGGCTGG
CCGTTCGACG GCGCGGTCGC ATTCGAAGCC GGCGACGAGC GCCGCCTGTT TCACGTGATC
GACGGGTGGC GCTATCTCGG TGCGGCCGAA TCACTCGACG CGGCCATGCG GCTCGCGGCC
GACGGCCTGG ACGGTGCATA CGAACCCCAT ACCCATCGCG TGCTGCAGAC TCATCTCGCG
CGCGGCCTGC AACTGATTCC GCTCGCGGCG CTCACGCCAG CCGACTGA
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| Protein sequence | MSDSRPSDPA CEHPLVFVDL ETTGGSTAEH RITEIGVVEI GPLGVSTWTT LVNPGQSIPP
FIQQLTGISD DMVRDAPSFA SLAPTLFERL DGKLFVAHNA SFDRGFLRAE FERAGIAFNP
DVLCTVRLSR ALFPREARHG LDALIERHGL VPAARHRALA DADLLWQFWR QLHEIVPLER
LRDQIARTTR HFRLAGGMTE AWLDTAPAGC GVYALFGEGD EALYVGRSVR VRQRLRALLT
GERRSSKEMR LAQQVRRVEW RETGNELGAM LAEAQWIARL RPSHNRRPAA DKARAGNAGW
PFDGAVAFEA GDERRLFHVI DGWRYLGAAE SLDAAMRLAA DGLDGAYEPH THRVLQTHLA
RGLQLIPLAA LTPAD
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