| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BamMC406_0869 |
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| Symbol | rph |
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| ID | 6178545 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria MC40-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010551 |
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| Strand | - |
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| Start bp | 956531 |
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| End bp | 957271 |
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| Gene Length | 741 bp |
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| Protein Length | 246 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 641680615 |
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| Product | ribonuclease PH |
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| Protein accession | YP_001807576 |
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| Protein GI | 172059924 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0689] RNase PH |
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| TIGRFAM ID | [TIGR01966] ribonuclease PH |
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Plasmid Coverage information |
| Num covering plasmid clones | 29 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 32 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGACGTCTT CCCTGTCCCG CCCGAGCGGC CGTCGCGCCG ACGAACTGCG CAAGGTCGCG
CTGACGCGCC ACTACACGAA ACATGCCGAA GGCTCGGTCC TGGTCGAATT CGGCGACACC
AAGGTGATCT GCACCGCGAG CGTCGCCGAA CGCGTGCCCG AATTCCTGCG CGATCGCGGC
CAAGGCTGGC TGACGGCCGA ATACGGGATG CTGCCGCGCG CGACGCACAC GCGCAGCGAC
CGTGAAGCCG CACGCGGCAA GCAGACCGGC CGTACGCAGG AAATTCAGCG CCTGATCGGA
CGCGCGCTGC GCGCGGTGTT CGATCTCGAG GCGCTGGGCC CGCGCACGAT CCACATCGAC
TGCGACGTGA TCCAGGCCGA CGGCGGCACG CGCACGGCAA GCATCACCGG CGCGTTCGTC
GCCGCGCACG ACGCCGTGTC GAAGCTGATC GCGGCCGGCA AGCTCGCACG CTCGCCGATC
ACCGATCACG TCGCCGCGAT TTCGGTCGGC GTGTACGAAG GCGTGCCGTT GCTCGACCTC
GACTACGCGG AAGATTCGCG CTGCGACACC GACATGAACG TCGTGATGAC GGGCGCCGGC
GGCTTCGTCG AAGTCCAGGG CACCGCCGAA GGCGTGCCGT TCTCGCGCGC CGAGATGAAC
GCGCTGCTCG ACCTCGCGCA AAGCGGGATC GGCCAGCTCG TGCAGTTGCA GAAGGACGTG
CTGGGCGCCG GCCATGTCTG A
|
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| Protein sequence | MTSSLSRPSG RRADELRKVA LTRHYTKHAE GSVLVEFGDT KVICTASVAE RVPEFLRDRG
QGWLTAEYGM LPRATHTRSD REAARGKQTG RTQEIQRLIG RALRAVFDLE ALGPRTIHID
CDVIQADGGT RTASITGAFV AAHDAVSKLI AAGKLARSPI TDHVAAISVG VYEGVPLLDL
DYAEDSRCDT DMNVVMTGAG GFVEVQGTAE GVPFSRAEMN ALLDLAQSGI GQLVQLQKDV
LGAGHV
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