| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BamMC406_0798 |
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| Symbol | |
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| ID | 6178264 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria MC40-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010551 |
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| Strand | - |
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| Start bp | 891519 |
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| End bp | 892826 |
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| Gene Length | 1308 bp |
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| Protein Length | 435 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 641680546 |
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| Product | urea ABC transporter, urea binding protein |
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| Protein accession | YP_001807510 |
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| Protein GI | 172059858 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0683] ABC-type branched-chain amino acid transport systems, periplasmic component |
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| TIGRFAM ID | [TIGR01409] Tat (twin-arginine translocation) pathway signal sequence
[TIGR03407] urea ABC transporter, urea binding protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 0.398503 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 27 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAACGTC GCAGTCTGCT GAAGTTCGGT TCGATGGCCG GTGCACTCGC GCTGGCGGGC
AAGAGTCCGT TCGCGCAAGC GGCCGATGCG GGCACCGGCC CGATCAAGGT CGGCATCCTG
CATTCGCTGT CGGGCACGAT GGCGATCTCC GAAACGTCGC TGAAGGACAC GGCGCTGATG
ACGATCGCCG ACATCAACAA GAGCGGCGGC GTGATGGGCC GCAAGCTCGA GCCGGTGGTC
GTCGATCCCG CATCGAACTG GCCGCTGTTC GCGGAGAAGG CGCGCCAGCT GCTCACTCAG
GACAAGGTCG CGTGCGTGTT CGGGTGCTGG ACGTCGGTGT CGCGCAAGTC GGTGCTGCCG
GTGTTCGAGG AACTGAATGG CCTGCTCTAC TACCCGGTGC AGTACGAAGG CGAGGAAATG
TCGCGCAACG TGTTCTATAC GGGCGCCGCG CCGAACCAGC AGGCGATACC GGCCGTCGAG
TACCTGATGG GCGCGGAAGG CGGCGGCGCG AAGCGCTTCT TCCTGCTCGG CACCGACTAC
GTGTATCCGC GCACGACCAA CAAGATCCTG CGTGCGTTCC TGAAATCGAA GGGCGTGAAG
GACGCCGACA TTCAGGAGGT CTACACGCCG TTCGGCCACA GCGATTACCA GACGATCGTC
GCGAACATCA AGACCTTCGC GCAGGGCGGC AAGACGACCG TGATCTCGAC GATCAACGGC
GATTCGAACG TACCGTTCTA CAAGGAACTC GGCAACCAGG GGATCAAGGC GACCGACGTG
CCGGTGGTCG CGTTCTCGGT CGGCGAGGAG GAACTGCGCG GGATCGACAC GAAGCCGCTC
GTCGGCCACC TTGCCGCATG GAACTACTTC ATGTCGGTGA AGAACCCGAC GAACACGAAG
TTCAAGGACC AGTTCGCCGC ATGGGTGAAG GCGAACAACC TGCCGGGCGG CGCGAAGCGC
GTGACCAACG ATCCGATGGA GGCGACCTAT GTGGGCATCC ACATGTGGAA GCAGGCCGTC
GAGAAGGCGA AGAGCACCGA CGTCGACAAG GTGCGCGTCG CGATGATCGG CCAGAGCGTT
GTCGCGCCGT CGGGCTTCAC GCTGTCGATG GACGGCAATC ACCACCTGCA CAAGCCGGTG
ATGATCGGCG AGATTCGCGG CGACGGGCAA TTCAACGTCG TGTGGAAGAC GAAGACGGCC
GTGCGCGCGC AGCCGTGGAG CCCGTTCATC GCGGGCAACC AGGGCAAGCC GGACATCGTC
AGCTCGATCC CGGCATTCCT GCGGCGGCAG CGCGCGGCGC TCGCCTGA
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| Protein sequence | MKRRSLLKFG SMAGALALAG KSPFAQAADA GTGPIKVGIL HSLSGTMAIS ETSLKDTALM
TIADINKSGG VMGRKLEPVV VDPASNWPLF AEKARQLLTQ DKVACVFGCW TSVSRKSVLP
VFEELNGLLY YPVQYEGEEM SRNVFYTGAA PNQQAIPAVE YLMGAEGGGA KRFFLLGTDY
VYPRTTNKIL RAFLKSKGVK DADIQEVYTP FGHSDYQTIV ANIKTFAQGG KTTVISTING
DSNVPFYKEL GNQGIKATDV PVVAFSVGEE ELRGIDTKPL VGHLAAWNYF MSVKNPTNTK
FKDQFAAWVK ANNLPGGAKR VTNDPMEATY VGIHMWKQAV EKAKSTDVDK VRVAMIGQSV
VAPSGFTLSM DGNHHLHKPV MIGEIRGDGQ FNVVWKTKTA VRAQPWSPFI AGNQGKPDIV
SSIPAFLRRQ RAALA
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