Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BamMC406_0750 |
Symbol | groEL |
ID | 6178388 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia ambifaria MC40-6 |
Kingdom | Bacteria |
Replicon accession | NC_010551 |
Strand | + |
Start bp | 836170 |
End bp | 837810 |
Gene Length | 1641 bp |
Protein Length | 546 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 641680498 |
Product | chaperonin GroEL |
Protein accession | YP_001807462 |
Protein GI | 172059810 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG0459] Chaperonin GroEL (HSP60 family) |
TIGRFAM ID | [TIGR02348] chaperonin GroL |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.20211 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 17 |
Fosmid unclonability p-value | 0.100291 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCAGCTA AAGACGTCGT ATTCGGCGAT TCCGCCCGTT CGAAGATGGT CGAAGGCGTG AACATTCTCG CCAACGCGGT CAAGGTCACG CTGGGTCCGA AGGGCCGCAA CGTGGTGCTC GAGCGCAGCT TCGGCGGCCC GACGGTCACC AAGGACGGTG TGTCGGTCGC GAAGGAAATC GAGCTGAAGG ACAAGCTCCA GAACATGGGC GCGCAAATGG TCAAGGAAGT CGCTTCCAAG ACCAGCGACA ACGCAGGCGA CGGCACGACG ACGGCAACCG TCCTCGCGCA ATCGATCGTT CGCGAAGGCA TGAAGTACGT CGCATCGGGC ATGAACCCGA TGGACCTGAA GCGCGGCATC GACAAGGCAG TCGCAGCGGC CGTCGAAGAG CTGAAGAAGA TCAGCAAGCC GTGCACGACG AACAAGGAAA TCGCGCAGGT CGGCTCGATC TCGGCGAACA GCGACACGTC GATCGGCGAT CGCATCGCTG AAGCGATGGA CAAGGTCGGC AAGGAAGGCG TGATCACCGT CGAAGACGGC AAGTCGCTCG CCGACGAACT CGACGTCGTC GAAGGCATGC AGTTCGACCG CGGCTACCTG TCGCCGTACT TCATCAACAA CCCGGAAAAG CAAGTCGCCG TCCTCGACAA CCCGTTCGTG CTGCTGCACG ACAAGAAGGT GTCGAACATC CGTGATCTGC TGCCGGTACT CGAGCAAGTC GCGAAGGCTG GCCGTCCGCT GCTGATCATC GCTGAAGACA TCGAAGGCGA AGCGCTCGCA ACGCTGGTCG TCAACAACAT CCGCGGCATC CTGAAGACCG TCGCGGTCAA GGCACCGGGC TTCGGCGATC GTCGCAAGGC GATGCTGGAA GACATCGCGA TCCTGACCGG CGGCCAGGTG ATCGCGGAAG AAACCGGCCT GACGCTCGAG AAGGCAACGC TGGCAGAACT GGGCCAGGCG AAGCGCATCG AAGTGGGCAA GGAAAACACG ACGATCATCG ACGGCGCAGG CGAAGCCGCG AACATCGAAG CACGCGTGAA GCAAGTGCGC GCGCAAATCG AAGAAGCGAC GTCGGACTAC GACCGTGAAA AGCTGCAAGA GCGCGTGGCC AAGCTGGCCG GCGGCGTGGC AGTGATCAAG GTCGGCGCTG CGACCGAAGT CGAAATGAAG GAAAAGAAGG CACGTGTCGA AGACGCACTG CACGCAACGC GTGCAGCTGT GGAAGAAGGC ATCGTGGCAG GCGGCGGCGT TGCGCTGATC CGCGCTCGCA CGGCAATCGC AAGCCTGACC GGCGCGAACG CCGACCAGAA CGCCGGCATC AAGATCGTGC TGCGCGCGAT GGAAGAGCCG CTGCGTCAGA TCGTCACGAA CGGCGGCGAA GAAGCCAGCG TCGTGGTGGC GGCAGTTGCT GCAGGCCAGG GCAACTACGG CTACAACGCA GCAACGGGCG AGTACGTCGA CATGGTTGAA GCCGGCGTCG TCGACCCGAC CAAGGTCACG CGCACCGCAC TGCAGAACGC AGCTTCGGTT GCTGGCCTGC TGCTGACGAC GGACGCAGCT GTCGCAGAAC TGCCGAAGGA AGATGCACCG ATGCCGGGCG GCATGCCGGG CGGCATGGGC GGCATGGGCA TGGACATGTA A
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Protein sequence | MAAKDVVFGD SARSKMVEGV NILANAVKVT LGPKGRNVVL ERSFGGPTVT KDGVSVAKEI ELKDKLQNMG AQMVKEVASK TSDNAGDGTT TATVLAQSIV REGMKYVASG MNPMDLKRGI DKAVAAAVEE LKKISKPCTT NKEIAQVGSI SANSDTSIGD RIAEAMDKVG KEGVITVEDG KSLADELDVV EGMQFDRGYL SPYFINNPEK QVAVLDNPFV LLHDKKVSNI RDLLPVLEQV AKAGRPLLII AEDIEGEALA TLVVNNIRGI LKTVAVKAPG FGDRRKAMLE DIAILTGGQV IAEETGLTLE KATLAELGQA KRIEVGKENT TIIDGAGEAA NIEARVKQVR AQIEEATSDY DREKLQERVA KLAGGVAVIK VGAATEVEMK EKKARVEDAL HATRAAVEEG IVAGGGVALI RARTAIASLT GANADQNAGI KIVLRAMEEP LRQIVTNGGE EASVVVAAVA AGQGNYGYNA ATGEYVDMVE AGVVDPTKVT RTALQNAASV AGLLLTTDAA VAELPKEDAP MPGGMPGGMG GMGMDM
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