Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BamMC406_0719 |
Symbol | |
ID | 6178039 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia ambifaria MC40-6 |
Kingdom | Bacteria |
Replicon accession | NC_010551 |
Strand | + |
Start bp | 801898 |
End bp | 803202 |
Gene Length | 1305 bp |
Protein Length | 434 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 641680467 |
Product | fumarylacetoacetase |
Protein accession | YP_001807431 |
Protein GI | 172059779 |
COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
COG ID | [COG0179] 2-keto-4-pentenoate hydratase/2-oxohepta-3-ene-1,7-dioic acid hydratase (catechol pathway) |
TIGRFAM ID | [TIGR01266] fumarylacetoacetase |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.118527 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 29 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGCGAAC CCCAAGACTG GCGCGCGACA CTCGATCCGG CTCGCAAGAG CTGGGTCGAG ACGGCGAACG ATCCCGCCTG CGATTTTCCG ATCCAGAACC TGCCGTTCGG GATCTTCAGC GATGCGAAGC AGGCGGCGCG CCGCACGGGC GTCGCGCTCG GCGACCAGAT CGTCGACCTC GCCGCACTCG CGCGTGCGGG CCTCGTGACG CTGCCGGCCG GCGCCGACGT GTTCGCGGCA TCGACGCTCA ACCCGTTCAT CGCGCTCGGC CGCGATGCAT GGCGCAGCGT ACGCGTGCAG CTGTCGCAAC TGTTCTCGCG CGACGACGCG CGGCTGCGCG ATGACGCCGC GCTGCGCGCG CAGGTGCTCG TCGCGCAGCG CGGCGCGACG CTGCATCTGC CGGTCGACAT TCCCGGCTAC ACCGATTTCT ATTCGTCGAA GGAGCATGCG ACCAATGTCG GCTCGATGTT CCGTGATCCG AAGAATGCGC TGATGCCGAA CTGGTCGGAG ATGCCGATCG GTTACAACGG CCGGGCGTCG TCGGTGGTCG TGAGCGGCAC GCCGGTGCGG CGCCCGAGCG GGCAACTGAA GCTGCCCGAC GCGGAGCGTC CTGTGTTCGG CGCGTGCCGC AAGCTCGACC TGGAACTCGA GACGGGCTTC ATCGTCGGCC GCGGCAACGC GCTCGGCGAA CCGATTGCGT GCGAGGACGC CGAAGCGCAC ATCTTCGGGA TGGTGCTGCT CAACGACTGG AGCGCGCGGG ACATCCAGCA GTGGGAATAC GTGCCGCTCG GCCCATTCAA TTCGAAAGGC TTCGCGACGA CGATCTCGCC GTGGATCGTC ACGCTCGACG CGCTCGAACC GTTCCGCGTC GCGCAGCCCG AGCAGTCGCC GCAGCCGCTC GCGTATCTGC GCCACGCGGG CAAGCATGCG TTCGACATCG CGCTCGAAGT GACGCTGCGC GCGCAAGGGG CGGCCGAAGG GACGTCGATC TGCCGCACCA ACTTCAAGTA CATGTACTGG ACGATGGCGC AGCAGCTCGC GCATCACACG GTCGCGGGCT GCAACACGCG CGTCGGCGAC CTGATGGGCT CGGGGACGAT CAGCGGGCCG ACGAAGGACT CTTTCGGCAG CCTGCTCGAA CTGACGTGGA ACGGCAAGGA GCCGCTCGCG CTGAACGGCG GCGGCAGCCG CACGTTCATC GAGGACGGCG ACGAGCTCAC GCTCGCGGGC TGGTGCCAGG GCGACGGTTA TCGCGTCGGG TTCGGGGTGT GTGCGGGCAA GATTCTGCCC GCGCGGAGCG CGTGA
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Protein sequence | MSEPQDWRAT LDPARKSWVE TANDPACDFP IQNLPFGIFS DAKQAARRTG VALGDQIVDL AALARAGLVT LPAGADVFAA STLNPFIALG RDAWRSVRVQ LSQLFSRDDA RLRDDAALRA QVLVAQRGAT LHLPVDIPGY TDFYSSKEHA TNVGSMFRDP KNALMPNWSE MPIGYNGRAS SVVVSGTPVR RPSGQLKLPD AERPVFGACR KLDLELETGF IVGRGNALGE PIACEDAEAH IFGMVLLNDW SARDIQQWEY VPLGPFNSKG FATTISPWIV TLDALEPFRV AQPEQSPQPL AYLRHAGKHA FDIALEVTLR AQGAAEGTSI CRTNFKYMYW TMAQQLAHHT VAGCNTRVGD LMGSGTISGP TKDSFGSLLE LTWNGKEPLA LNGGGSRTFI EDGDELTLAG WCQGDGYRVG FGVCAGKILP ARSA
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