| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BamMC406_0718 |
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| Symbol | |
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| ID | 6178972 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria MC40-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010551 |
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| Strand | + |
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| Start bp | 800567 |
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| End bp | 801901 |
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| Gene Length | 1335 bp |
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| Protein Length | 444 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 641680466 |
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| Product | homogentisate 1,2-dioxygenase |
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| Protein accession | YP_001807430 |
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| Protein GI | 172059778 |
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| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG3508] Homogentisate 1,2-dioxygenase |
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| TIGRFAM ID | [TIGR01015] homogentisate 1,2-dioxygenase |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.10992 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 30 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACGCTTG ACCTGTCGAC ACCGGCAACC GCCGGCTACC TGAGCGGATT CGCGAACGAA
TTCGCGACCG AGGCGCTGCC CGGCGCGCTG CCGCACGGCC GCAATTCGCC GCAGCGCGCG
CCTTACGGCT TGTATGCGGA GCAGCTGTCG GGCACCGCGT TTACCGCGCC GCGCGGCCAC
AACCGACGCT CGTGGCTGTA CCGGATCCGG CCGGCGGCCG TGCACCGGCC GTTCGAGCCG
GTCACGGGCC CGCAGCGGCT CGTGTCGGAA TTCGGCGATT CGGCCGACGT GCCGCCGACG
CCGCCGAACC AGCTGCGCTG GGATCCGCTG CCGATGCCGG TCGAGCCGAC CGATTTCGTC
GAAGGGCTCG TGACGATGGC CGGCAACGGC TCGGCGGCCG CGATGAACGG CTGCGCGATC
CACCTGTATG CGGCGAACCG CTCGATGCAG GACCGGTTCT TCTACAGCGC CGACGGCGAG
CTGCTGATCG TGCCGCAGCA GGGGCGGCTC TTCATCGCGA CCGAATTCGG CCGGCTCGAC
GTCGAGCCGT TCGAGATCGC GGTGATCCCG CGCGGCGTGC GTTTTTCCGT CGCGCTGCCG
GACGGTGACG CGCGCGGCTA CATCTGCGAG AACTTCGGCG CGCTGCTGCG CCTGCCGGAT
CTCGGCCCGA TCGGCTCGAA CGGGCTCGCG AACCCGCGCG ATTTCCTGAC GCCGCAGGCC
GCATACGAGG ACCGCGAAGG CGCGTTCGAG CTGGTCGCGA AGCTGAACGG ACGCCTCTGG
CGCGCGGACA TCGGCCATTC GCCGTTCGAC GTCGTCGCGT GGCACGGCAA CTACGCGCCG
TACAAATACG ACCTGCGCCT GTTCAACACG ATCGGCTCGA TCAGCTTCGA CCACCCGGAT
CCGTCGATCT TCCTCGTGCT GCAATCGCAG AGCGACACGC CGGGCGTCGA CGCGATCGAC
TTCGTGATCT TCCCTCCGCG CTGGCTCGCG GCCGAGGATA CGTTCCGCCC GCCGTGGTTC
CATCGCAATG TCGCGAGCGA GTTCATGGGG CTCGTGCACG GCGCGTACGA CGCGAAGGCC
GAGGGCTTCG TGCCGGGCGG CGCGAGCCTG CACAACTGCA TGTCGGGCCA CGGGCCCGAC
GCGGACACGT TCGAGAAGGC GTCGGCGAGC GACACGACGA AGCCGCACAA GGTCGATGCG
ACGATGGCGT TCATGTTCGA AACCCGCACG CTGATCCGTC CGACGCGCTA CGCGCTCGAC
ACCGCGCAGC TGCAGGCCGA CTACTTCGAA TGCTGGCAAG GCATCAGGAA ACATTTCAAT
CCGGAGCAAC AATGA
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| Protein sequence | MTLDLSTPAT AGYLSGFANE FATEALPGAL PHGRNSPQRA PYGLYAEQLS GTAFTAPRGH
NRRSWLYRIR PAAVHRPFEP VTGPQRLVSE FGDSADVPPT PPNQLRWDPL PMPVEPTDFV
EGLVTMAGNG SAAAMNGCAI HLYAANRSMQ DRFFYSADGE LLIVPQQGRL FIATEFGRLD
VEPFEIAVIP RGVRFSVALP DGDARGYICE NFGALLRLPD LGPIGSNGLA NPRDFLTPQA
AYEDREGAFE LVAKLNGRLW RADIGHSPFD VVAWHGNYAP YKYDLRLFNT IGSISFDHPD
PSIFLVLQSQ SDTPGVDAID FVIFPPRWLA AEDTFRPPWF HRNVASEFMG LVHGAYDAKA
EGFVPGGASL HNCMSGHGPD ADTFEKASAS DTTKPHKVDA TMAFMFETRT LIRPTRYALD
TAQLQADYFE CWQGIRKHFN PEQQ
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