Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BamMC406_0712 |
Symbol | |
ID | 6178213 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia ambifaria MC40-6 |
Kingdom | Bacteria |
Replicon accession | NC_010551 |
Strand | + |
Start bp | 795060 |
End bp | 795851 |
Gene Length | 792 bp |
Protein Length | 263 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 641680460 |
Product | IclR family transcriptional regulator |
Protein accession | YP_001807424 |
Protein GI | 172059772 |
COG category | [K] Transcription |
COG ID | [COG1414] Transcriptional regulator |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 0.326731 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 32 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACACTTT CAACCATCGA CGAAACCACG ATCGACGAGC GCAAGTTCGT CGTTGCGCTC GCGCGCGGGC TCGACCTGCT GCGCGCGTTC CGGCCCGGCG AGACGATGCT CGGCAATCGC GACTTCGCGG AGCGCACCGG GCTGCCCAAG GCGACGGTGA ACCGGCTCGC GTACACGCTG ACCGTGCTCG GCTACCTGCG CTATGACGAA ACGCTCGGAA AGTATGCGCT CGACGCCGGC GTGCTGTCGC TCGGCTACGC GCTGCTGTCC GGCTCGGGGA CGATCGATCT CGCGCGGCCG CACATGCAGG CGCTCGCGCG CGAAATCGGC GCGGCCGTGT CGCTCGGGTG CCGCGATGGG CTCGACATGA TCTACCTGGA GACGATCCGC AGCGAAACCG CGCTGACGCT CGGGCTCGCG CCCGGCTCGC GGCTGTCGAT GCTGACGAGC TCGATGGGCC GCGCGTACCT CGCCGTGCAG CCGGAGGACG TGCGCCGCGC GCTTTATGCG GAGCTGCACC GGGCGGCCGG CAGCGCGGCC GACGCGGATG CGCTCGTCGC GGCCGCGCAG CTTGCGGTGG CCGAGTTCTC CGAGGGCGGA TGCTGCTATT CGTTTCGCGC GTGGCACATG GACGTGAACG CGGCGGCCGT GCCGTTTCGC GAGCCGCGCG AGGGGCGCTG GCTGATCCTG AGTTGCAGCG GGCCCGCTTC GTCGATGGAC GAGGACATGT TCCGCACGCA GGTCGGGCCG AAGCTGAAGG CGCTCGCGCA GCGGCTCGGG CCGACGGTCT AG
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Protein sequence | MTLSTIDETT IDERKFVVAL ARGLDLLRAF RPGETMLGNR DFAERTGLPK ATVNRLAYTL TVLGYLRYDE TLGKYALDAG VLSLGYALLS GSGTIDLARP HMQALAREIG AAVSLGCRDG LDMIYLETIR SETALTLGLA PGSRLSMLTS SMGRAYLAVQ PEDVRRALYA ELHRAAGSAA DADALVAAAQ LAVAEFSEGG CCYSFRAWHM DVNAAAVPFR EPREGRWLIL SCSGPASSMD EDMFRTQVGP KLKALAQRLG PTV
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