| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BamMC406_0695 |
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| Symbol | |
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| ID | 6178015 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria MC40-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010551 |
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| Strand | - |
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| Start bp | 782313 |
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| End bp | 783380 |
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| Gene Length | 1068 bp |
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| Protein Length | 355 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 641680443 |
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| Product | protein TolA |
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| Protein accession | YP_001807407 |
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| Protein GI | 172059755 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG3064] Membrane protein involved in colicin uptake |
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| TIGRFAM ID | [TIGR01352] TonB family C-terminal domain
[TIGR02794] TolA protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.0337402 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 33 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACCGGC AGCAATCCCC GCGCAGCAAC GCGTACCCGC ATCGGCCGCC TCGCGAGCGA
GGCACCTGGC GCGCGTTCGC GCTCGCCGCG CTGATGCACG TGCTGCTCGC ACTGTTCCTC
TATCACGGCG TGCAGTGGCA GAACAGCACG CCGGCCGGCG CCGAGGCCGA GCTGTGGACC
GAGGTGCCCG ACGTCCCCGC GCCGCGGCCC GTCGTCACGC CCACGCCGCC CGCGAAGCTC
GCACCGCCCC CTCCCCCGGT CCGGGACGAG CAGGCGGACA TCGCGCTGCA GCAAAAGAAA
CGACAGCAGG AAGCGGCCGC GCGCGAAGCG CTGCTCGAGC AGCAGCGCCG CGCGCAGCAG
TTGAAGGCCC AGCAGGAGGA AGCCCGGCGC GAGCAGCTCG CAGCCCAGCA GGCCGCCGCG
CTCGCCGCGC AGAAGGCCGC CGAGCGCGAC AAGCAGAAGC AGGCGGACAA GCTCAAGCAA
CAACAGCTCG TGGAGCAGCA GAAGCTCGAA CAGCAGAAGG CCCAGCAGCA GAAACAGCAG
CAACAGAAGC AGGCGCAGCT GGAAGCCCAG GAGGCGGCGA AGGCCAAGGC CGACGCGGCC
GCGAAGGCGA AGGCGGAATC CCAGGCGAAG GCGAAGGCCG AAGCAGCTGC GCGCGCAAAG
GCCGATGCGG CGGCGAAGGC GAAGCTCGAC CGGGAACGGA ATGCGCGACT CGCGCAGATG
CAGGGCCTGG CGGGTGCCGG CGAAGGCGGC GGCCAGGGGC TTGCGAAAAG CGGCACCGGC
ACGGGTTCCG GCGGCAATGC CGCGTCGCCC GGCTATGCCG ACAAGGTGCG CCGCCGCGTG
AAGCCGAACA TCGTCTGGGG CGGCGAGCGT GCGGGGCTCA CGACGATCGT CAAGATCCGC
TGTACGCCTT CGGGCGACCT GCTGAGCGTG TCGGTCTCGC GGCCGAGCGG CAATTCGGGG
TGGGATCAGG CGGTCGTCAA CGCGATCCAG GCGTCGGTTC CGTTACCCCC CGATACTGAC
GGCCATACCC CGTCCAGCAT TACGATTACC TTCAAGGCGG CGGAGTGA
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| Protein sequence | MNRQQSPRSN AYPHRPPRER GTWRAFALAA LMHVLLALFL YHGVQWQNST PAGAEAELWT
EVPDVPAPRP VVTPTPPAKL APPPPPVRDE QADIALQQKK RQQEAAAREA LLEQQRRAQQ
LKAQQEEARR EQLAAQQAAA LAAQKAAERD KQKQADKLKQ QQLVEQQKLE QQKAQQQKQQ
QQKQAQLEAQ EAAKAKADAA AKAKAESQAK AKAEAAARAK ADAAAKAKLD RERNARLAQM
QGLAGAGEGG GQGLAKSGTG TGSGGNAASP GYADKVRRRV KPNIVWGGER AGLTTIVKIR
CTPSGDLLSV SVSRPSGNSG WDQAVVNAIQ ASVPLPPDTD GHTPSSITIT FKAAE
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