| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BamMC406_0693 |
|---|
| Symbol | |
|---|
| ID | 6178220 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia ambifaria MC40-6 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010551 |
|---|
| Strand | - |
|---|
| Start bp | 780382 |
|---|
| End bp | 780891 |
|---|
| Gene Length | 510 bp |
|---|
| Protein Length | 169 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | 641680441 |
|---|
| Product | peptidoglycan-associated lipoprotein |
|---|
| Protein accession | YP_001807405 |
|---|
| Protein GI | 172059753 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG2885] Outer membrane protein and related peptidoglycan-associated (lipo)proteins |
|---|
| TIGRFAM ID | [TIGR02802] peptidoglycan-associated lipoprotein |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 0.017916 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 32 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGATGTCGA ATAAAGCTCG TCTGGCCCTG GCCGTGATGA TGATCAGCGC GCTCGCAGCG
TGTAAGTCGG GCGTGAAGCT CGACGACAAG GCCAACGCTG GTGCGGTGAG CACGCAGCCG
AGCGCCGACA ACGTCGCGCA AGTGAACGTC GATCCGCTGA ACGATCCGAA CAGCCCGCTC
GCGAAGCGCA GCATCTACTT CGACTTCGAC AGCTATTCGG TGAAGGACGA GTATCAGCCG
CTGATGCAGC AGCACGCTCA GTACCTGAAG AGCCACCCGC AGCGTCACGT GCTGATCCAG
GGCAACACCG ACGAACGCGG CACGAGCGAG TACAACCTCG CGCTGGGCCA GAAGCGTGCG
GAAGCTGTCC GCCGCGCGAT GGCACTGCTC GGCGTGAACG ACTCGCAGAT GGAAGCCGTG
AGCCTCGGCA AGGAAAAGCC GCAAGCATCG GGCCACGACG AAGCATCGTG GGCGCAGAAC
CGTCGCGCCG ACCTCGTCTA CCAGCAGTAA
|
|---|
| Protein sequence | MMSNKARLAL AVMMISALAA CKSGVKLDDK ANAGAVSTQP SADNVAQVNV DPLNDPNSPL
AKRSIYFDFD SYSVKDEYQP LMQQHAQYLK SHPQRHVLIQ GNTDERGTSE YNLALGQKRA
EAVRRAMALL GVNDSQMEAV SLGKEKPQAS GHDEASWAQN RRADLVYQQ
|
|---|
| |