Gene BamMC406_0684 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBamMC406_0684 
SymbolmiaA 
ID6178214 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia ambifaria MC40-6 
KingdomBacteria 
Replicon accessionNC_010551 
Strand
Start bp771197 
End bp772171 
Gene Length975 bp 
Protein Length324 aa 
Translation table11 
GC content72% 
IMG OID641680431 
ProducttRNA delta(2)-isopentenylpyrophosphate transferase 
Protein accessionYP_001807396 
Protein GI172059744 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0324] tRNA delta(2)-isopentenylpyrophosphate transferase 
TIGRFAM ID[TIGR00174] tRNA isopentenyltransferase (miaA) 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones33 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCGCTT CACCGCAGTC CCGTCCGACG ACGATCGCCT GCCTGCTCGG CCCCACCGCA 
TCGGGCAAGA CCGCCGCCGC GCTGGCGCTC GCCGCGCGCC GCCCGATCGA GATCGTCAGC
ATCGATTCGG CGCTCGTCTA TCGCGACATG GATATCGGCA CCGCGAAGCC GACGCGCGAC
GAACGCGCGC GCGTGCCGCA CCATCTGATC GACATCATCG ACCCGGCCGA TGCGTATTCG
GCGGCCGAAT TCCGTGCCGA CGCGCTGCGC CTGATCGGAG AGATCGCCGC GCGCGGCCGC
ACGCCGCTGC TCGCGGGCGG CACGATGCTG TACTACAAGG CGCTGACGCA GGGCCTCAAC
GACCTGCCGA CCGCCGATCC GGCCGTGCGC GCGGAGCTCG ACGCCGACGC CGCGCGCGAC
GGCTGGCCCG CGCTGCATGC GCGGCTCGCG CAGGTCGACC CGGCGACGGC CGCGCGGCTC
GCGCCGAACG ATTCGCAGCG GATCCAGCGC GCGCTCGAAG TGTTCCTGCT GAGTGGTCAG
CCGATGTCGG TGCTGCTTGC CGCGCCGCGC CGCGCGGACG ACGAGGCCGC CGCGTACCGC
TTCGTGCCGG TCGCGCTCGA ACCGTCGGAC CGCGCGGTGC TGCACGCGCG CATCGCGCAA
CGCTTCGACG CGATGCTCGA CGCGGGCTTC ATCGACGAGG TCGAACGGCT GCGCCGCCGC
GAAGATCTGC ATCCCGACCT GCCGTCGATG CGCTGCGTCG GCTACCGGCA GGCGTGGGAA
TTCCTCGACG GCGACACCGA CTACCGGACC ATGCGCGACA AGGGCATCTT CGCGACCCGC
CAGCTGTGCA AGCGGCAGAT CACGTGGCTG CGCGCGTTGC CCGAGCGGAT CGTCGTCGAC
TGTGTCGCGC CGGATGCGAC CGCGCGCGCG CTCGACACGC TCGAACGCGT ACTGGACGAC
CACCTGCCGG CCTGA
 
Protein sequence
MSASPQSRPT TIACLLGPTA SGKTAAALAL AARRPIEIVS IDSALVYRDM DIGTAKPTRD 
ERARVPHHLI DIIDPADAYS AAEFRADALR LIGEIAARGR TPLLAGGTML YYKALTQGLN
DLPTADPAVR AELDADAARD GWPALHARLA QVDPATAARL APNDSQRIQR ALEVFLLSGQ
PMSVLLAAPR RADDEAAAYR FVPVALEPSD RAVLHARIAQ RFDAMLDAGF IDEVERLRRR
EDLHPDLPSM RCVGYRQAWE FLDGDTDYRT MRDKGIFATR QLCKRQITWL RALPERIVVD
CVAPDATARA LDTLERVLDD HLPA