Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BamMC406_0659 |
Symbol | |
ID | 6177043 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia ambifaria MC40-6 |
Kingdom | Bacteria |
Replicon accession | NC_010551 |
Strand | - |
Start bp | 741552 |
End bp | 745748 |
Gene Length | 4197 bp |
Protein Length | 1398 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 641680406 |
Product | hypothetical protein |
Protein accession | YP_001807371 |
Protein GI | 172059719 |
COG category | [S] Function unknown |
COG ID | [COG3164] Predicted membrane protein |
TIGRFAM ID | [TIGR02099] conserved hypothetical protein TIGR02099 |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 27 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCCGACC GTCAGGAATC CGCCGTACCT GCGCCCGAAG CGGGACCTCC GAAGCACGAT CATCCTGTCC TGCGTCGCGT GTTCAGGGTG ACGCTGGCAG TCGGTATCGG CACCTACTTC GTCGCGTCCG CCTCGTTCCT CGGGCTGCGC TACGTGCTGC TGCCGCGCAT CGACGAATTC CGCCCGCGCA TCGAGCGCGC GGTGTCCGAC AAGCTCCACG CGCAGCTTTC GATCGGCAGA CTGTCTCCCC ACTGGTCCGG CATGCAGCCG GGCGTCGAAG TCACCGACCT GACGATTCGC GGCCGTGATG GCCGGATCGC GCTGTCGGTC CCGCACGCGA CGGCCGCGCT GTCGTGGATG TCGCTGCTGC GGCTGTCGCC CGCGCTGTCG AGCCTGATCG TCGACCACCC CGACCTCGTC GTCGCGCGCG CGGCCGACGG CTCGCTGAGC GTCGCGGGCG TCGGCGTCGC GACCACCCAT GGCGGCAACG ACACGTTCAG CACGTGGCTG CTGAAGCAGG AAGCGATCGT CCTGCGCAAC GGCACGCTGC GCTGGCGCGA CGCGCAGCAC GACGCACCGG AACTCGCGCT GTCGGGCATT CGCCTGGCGG TGCTCAACCA CGGCCGCGTG CACAAGGCCG CGCTGCAGGC GCCGGCGAAC GGTACGCTGC TGCTCGGCCC GCTCGATTTC CGCGCGCGCT TCCGGCACAA GCCGCTCCAG CCGATCGGCA AGCCGACGAA CTGGACCGGC GACGCGTACC TGTCGACCGG CCCGGTCGAC CTGCAGACCC TCGGCCGCTA TCTCGACATT CCGCTCACGA TCCATGCGGG CCGGATCGAC AACGCGATCT GGGCGACCTT CGAGGACGGC CACCTGCGCT CCGCGGGCGG CGACCTGCAG GGCGCCGACG TCGTGCTGCG CGTGCGGCCG ACCCAGCCAC GCCTCGACGT GCCGACAGTC GGGTTCGGCT GGGACATGGC GCTGAACGCC GGCCGCGACT ACACGCTGCA CCTGACGCGC TTCAACGCGG AGCTCGGCCA GCCGCCGCTG CCGGACGGCA CGCCGCTCGC GCGCTCGCTC GCGCTGTCGA CGCTGACCGC CCGCTACCGT GTGCCGGCCG CCGATCAGGG CCAACTGCTG AGTGTCGTCG GCGACCGCGT CGATCTCGGC ATCCTCAGCG AGTTCATCCG CGGGCTGCCG CTGCCGGCAC GCCTGCGCAA CGAGCTGATC AAGCTCGACC CGCGCGGGAT GGTGTCGAAC TACCACATCG AGGTCGAACG CGCGAAGCCG GCGCGGCCCG ACCTCGCCGA CGAAGAGCGG CGCATGGGCG CCGCGCCGAT CGTGCGCTAC CGCTTCCTCG GCGATCTGCA GGGCATCAGC GTCGCCGCGC AGGAGCCGCC GCCGGGCTTG TCGCCGCGCG GTCACCCGCG CGCCGGCTGG CCGGGCGTCG AGAATTTGTG GGGCCGCGTC GATGCGAACG AGACCGGCGG CAGCGCGCAC TTCGACACGG TCAACGCCGC GGTCACGGTG CCCGGCGAAT TCGACCAGCC GCGCCTGACC TTCGACCGGC TGCGCGGCAA CGCGAAATGG GTGATCACGC CGGCGCCGGG CGACAAGCAC GCGCGCGTCG ACGTGACGTT GCCCGACCTG TTCGTCTCGA ACCCCGATGC CGAAATCGCG GTGTCGGGCT CGTACACGAA CCCCGGCCAC GGCCGCGGCT CGCTCGACCT GCGCGCGGAT TTCGCGCGCG CGTCGGTGGC GCGCATTCCG CGCTACCTGC CGACCGGGAT GTCCGAACGC CTGCGCCAGT ATCTCGGCCA TGCGCTGCAG GACGGCCAGG TGACCAAGGG CGCGTCGATC GTCGCGCGCG GCCCGCTCGA GAAATTCCCG TTCTCACACG AGCCGGATGC CGGCGTGTTC CATATCGTCG CGCCATTCAC CGGCGGGCGC TTCGAGCCGA CGCCGTACCC GCCGCGCAAG CTCGCGAACG GCACGCCGAG CGTCTGGCCG GCACTCGACG CGATCGACGG CGTGTTCGAG CTCGCGCAGA ACAAGCTGCA CTTCGACATC GCCCGCGCGC GCTACAAGCG CGTCGCGCTG ACCAACGTTG CCGGCCGGAT CGACGATCTC GGCAACCCGT CGAAGTCGCC GCTCATCATC GACGGCCATG CGCAAGGCCC GCTCGCGGAC CTGATCGACT ACGCGGACAA CAGCTCGCTC GGCACGATGA GCGGGCACAT CGGCCAGCGG ATCGACGCGC AGGGGCCCGC GGCGCTCGCG CTCAAGATCA CGATTCCGCA GCACGTGCCG CACCCGCATA CGCACGTCGA AGGCGCCCTC GCGTTCGGCG GCAACACGCT GTCGACCGAC GGCGTGCCGC CGCTGTCCGC GCTGCGCGGC AGCGTGCGAT TCAGCGAGGC CGGCGCGTCG CTGCACGACC TGTCGGGGCG CTTCCTCGGC GGCCCGGTGC GCGCGAACGG CAACTTCCAG TCGCATGGCC CGTACGCGGT GAACGTCGAC GGCAAGCTCG CGCTCGACGC CACGCGCGGC CTGAACCTGC ACGGCACGGC CGCGGCGCTG CTCGAGCACG TGGTCGGCGA CGCGCCGTAC CACGTCGCCG TGCGCGGCGC GCCGGGCCGC CTGCCGGAGG TCACCGCGCA TTCCGACCTG ACGGGCGTCG CGCTGAACTT CCCCGCGCCG TTCGCGAAAC CGGCCGGCAC GCCGATGCCG TTCCGCTTCA CGCTGCAGCC GGCCGCCGAG GCCGACGGCA AGCGCCTCGA ACATGCCGAC CTGACGCTTG GGCCCGTGTC CGCGACCTAC CTGCTGGACG CGACGCGCGG CCAGCCGCTG CGCGCGGTGC GCGGCGCGAT GGGCATCCAC CGGATGCCCG ACCTGCCGCA GGACGGCGTG AGCGCGGCCG TCGACGTCGA CGAACTGGAC GCCGACGCAT GGCTCGCGCT GGCCCGCACG CTGCAGCACG ACACCCCGCG CGCACCGGAG CCGGCCGCGC CGCGCATCGA CGTCGCGAGC TTCACGCCGA AGCGCTTCGC GCTGCACTTC GGCACGCTGA AGCTGCTCAA GCGCAACTGG GAAAACGTGA TCATCGGCGC GTCGCACGTC GACGAGCTGT GGCAGGCGAA CATCGCGTCG AACCAGGTCT CGGGCTACCT GTCGTGGGCG CAGGGCGGCG GTCACAACGG CGCGGGCGTG CTGAACGCGC GGCTCGCGAA GCTCGTGATT CCGCAAAGCG CGCAGCACGA CCTCGTCGGC CGCGCGATGA ACCTGCCGAC GCCGACCGAC CGGCCGATGC CGTCGGTCGA CCTGATCGTC GACCAGGTCG TCGCGCGCGA TCACGACATC GGCCGGCTCG TCGTCAATGC GCGCAACATC GACGAGGACG GCGCGCCGGT GTGGCAGCTC GACAAGCTCG AGCTGGCGAA CCCGGCCGCG AAGCTGACGG CGACCGGCAA CTGGCGCACC TCGCGCCGCG CGCTGGCCCG CGGCGTCGAC GAAAACGATG CGCCGCGCCG CAGCGTGTTC GACTTCAAGC TCGACATCGG CAACGCGGGC GCGCTGCTCG ATCTCGTCGG CCTGCCGCGC ACGGTCGCGA ACGGCCACGG CACGGTGACC GGCAAGGTCG GCTGGCGCGG CGGCCCCACC GCGGTCGATC TGCCGTCGCT CGGCGGCCAG GTCGCGGTCG ATCTCGAGCA CGGCCAGATC CTGAAGGTGG ATCCGGGTGC CGCGAAACTG CTCGGCGTGC TGAGCCTGCA GAGTCTCGCG CGCTTCCTGA CGCTGAATTT CCGCGACGTG GTCGGCAAGG GGCTGCCGTT CGACAAGATC ACCGGCACCA GCCGGATCTC GAACGGGATC GCGCGCACCG ACGACTTCTC GATGACGACG GCGCCGGCAA ACGTGACGGT GCGCGGTGCG GTCGACCTCG GCGCCGAGAC GCAGGACCTG CACGCGCACG TCGCACCGAA GATCGGCGCC GGCACGGCGG CGATCGCGGC CGCGATCATC AATCCGCTGC TCGGCGTCGG CGTGCTGGCC GCGAACTACG CGCTGTCGGA GACGCTGTCG CACGCGTTCG CGCTCGACTA CGCGATCACG GGCTCGTGGG CGCATCCGCA CATCGAGCGG GTGCGGGGCG ATCAGGGTAA GATGAATCAC GGTCCGGCCG ATGCGGCGAG CCATTGA
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Protein sequence | MSDRQESAVP APEAGPPKHD HPVLRRVFRV TLAVGIGTYF VASASFLGLR YVLLPRIDEF RPRIERAVSD KLHAQLSIGR LSPHWSGMQP GVEVTDLTIR GRDGRIALSV PHATAALSWM SLLRLSPALS SLIVDHPDLV VARAADGSLS VAGVGVATTH GGNDTFSTWL LKQEAIVLRN GTLRWRDAQH DAPELALSGI RLAVLNHGRV HKAALQAPAN GTLLLGPLDF RARFRHKPLQ PIGKPTNWTG DAYLSTGPVD LQTLGRYLDI PLTIHAGRID NAIWATFEDG HLRSAGGDLQ GADVVLRVRP TQPRLDVPTV GFGWDMALNA GRDYTLHLTR FNAELGQPPL PDGTPLARSL ALSTLTARYR VPAADQGQLL SVVGDRVDLG ILSEFIRGLP LPARLRNELI KLDPRGMVSN YHIEVERAKP ARPDLADEER RMGAAPIVRY RFLGDLQGIS VAAQEPPPGL SPRGHPRAGW PGVENLWGRV DANETGGSAH FDTVNAAVTV PGEFDQPRLT FDRLRGNAKW VITPAPGDKH ARVDVTLPDL FVSNPDAEIA VSGSYTNPGH GRGSLDLRAD FARASVARIP RYLPTGMSER LRQYLGHALQ DGQVTKGASI VARGPLEKFP FSHEPDAGVF HIVAPFTGGR FEPTPYPPRK LANGTPSVWP ALDAIDGVFE LAQNKLHFDI ARARYKRVAL TNVAGRIDDL GNPSKSPLII DGHAQGPLAD LIDYADNSSL GTMSGHIGQR IDAQGPAALA LKITIPQHVP HPHTHVEGAL AFGGNTLSTD GVPPLSALRG SVRFSEAGAS LHDLSGRFLG GPVRANGNFQ SHGPYAVNVD GKLALDATRG LNLHGTAAAL LEHVVGDAPY HVAVRGAPGR LPEVTAHSDL TGVALNFPAP FAKPAGTPMP FRFTLQPAAE ADGKRLEHAD LTLGPVSATY LLDATRGQPL RAVRGAMGIH RMPDLPQDGV SAAVDVDELD ADAWLALART LQHDTPRAPE PAAPRIDVAS FTPKRFALHF GTLKLLKRNW ENVIIGASHV DELWQANIAS NQVSGYLSWA QGGGHNGAGV LNARLAKLVI PQSAQHDLVG RAMNLPTPTD RPMPSVDLIV DQVVARDHDI GRLVVNARNI DEDGAPVWQL DKLELANPAA KLTATGNWRT SRRALARGVD ENDAPRRSVF DFKLDIGNAG ALLDLVGLPR TVANGHGTVT GKVGWRGGPT AVDLPSLGGQ VAVDLEHGQI LKVDPGAAKL LGVLSLQSLA RFLTLNFRDV VGKGLPFDKI TGTSRISNGI ARTDDFSMTT APANVTVRGA VDLGAETQDL HAHVAPKIGA GTAAIAAAII NPLLGVGVLA ANYALSETLS HAFALDYAIT GSWAHPHIER VRGDQGKMNH GPADAASH
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