Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BamMC406_0646 |
Symbol | |
ID | 6178073 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia ambifaria MC40-6 |
Kingdom | Bacteria |
Replicon accession | NC_010551 |
Strand | - |
Start bp | 727335 |
End bp | 728147 |
Gene Length | 813 bp |
Protein Length | 270 aa |
Translation table | 11 |
GC content | 72% |
IMG OID | 641680394 |
Product | pyrroline-5-carboxylate reductase |
Protein accession | YP_001807359 |
Protein GI | 172059707 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0345] Pyrroline-5-carboxylate reductase |
TIGRFAM ID | [TIGR00112] pyrroline-5-carboxylate reductase |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 33 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 29 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAAAATCG CATTCATCGG CGGCGGCAAC ATGGCCGCGG CCCTGATCGG CGGCCTGATC AAGCGCGGCG TTGCCGCTGA CGGCCTGTAT GCCATCGACG TCAACGAGGA CGTCCGCGCG CGCGCCGCGC AGCAATTCGG CATCCGCACC GGCGCGGCCA TCGACGCGAC GCTCGCCGGC TACGACGCGA TCGTGCTCGC GGTGAAACCG CAGGTGCTGA AGGACGTCGC GCAGGCACTC GCCCCGCATC TGAAGTCGCA GCTCGTGATC AGCATCGCGG CCGGCATCCG CGGCACCGAC CTCGCCCGCT GGCTCGGCGA CTACGCGCGC GTCGTGCGCA CGATGCCGAA CACGCCCGCG CTGGTCGGCA TGGGCGTGAC GGGCCTCGCC GCGCTGCCGG GCGTCGATGC GGCCGGTCGC GAGCTCGCGT CGAACGTGCT CGGCGCGGTC GGCGAGATCG TCTGGTTCGA CGACGAAGCG CAGCTCGATG CCGTCACCGC GATCTCGGGC AGCGGCCCGG CCTACGTGTT CTATTTCATC GAAGCGCTGC AGGAAGCCGC GCGCCGCCTC GGCATGAATG ACGAACAGGG CCGCGCGCTC GCGGTCGCGA CGTTCGCGGG TGCCGCGCAA CTCGCCGCGC AATCGGGCGA ACCGGCGAGC GTGCTGCGCG AGCGCGTGAC GTCGAAGGGC GGCACGACGG CCGCCGCGCT CGCGTCGTTC GACGCGCAGG GCGTGAAGGA AGCGATCGTG CGCGGCGCGC TGGCCGCCGA GGCGCGTGCG AAGGAAATGG GTGACGAGCT CGGCCGCGCG TAA
|
Protein sequence | MKIAFIGGGN MAAALIGGLI KRGVAADGLY AIDVNEDVRA RAAQQFGIRT GAAIDATLAG YDAIVLAVKP QVLKDVAQAL APHLKSQLVI SIAAGIRGTD LARWLGDYAR VVRTMPNTPA LVGMGVTGLA ALPGVDAAGR ELASNVLGAV GEIVWFDDEA QLDAVTAISG SGPAYVFYFI EALQEAARRL GMNDEQGRAL AVATFAGAAQ LAAQSGEPAS VLRERVTSKG GTTAAALASF DAQGVKEAIV RGALAAEARA KEMGDELGRA
|
| |