| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BamMC406_0620 |
|---|
| Symbol | |
|---|
| ID | 6176439 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia ambifaria MC40-6 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010551 |
|---|
| Strand | + |
|---|
| Start bp | 697630 |
|---|
| End bp | 698553 |
|---|
| Gene Length | 924 bp |
|---|
| Protein Length | 307 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 72% |
|---|
| IMG OID | 641680368 |
|---|
| Product | Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase |
|---|
| Protein accession | YP_001807333 |
|---|
| Protein GI | 172059681 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG0388] Predicted amidohydrolase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 26 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 24 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTCCACCT CAGTCATCGC CGCGCTGCAG ATCGGCGCAT CGCCCGCCGG CACGCGCGCC
ACGCTCGACA CGATCCTCGG CTACGAAACC GCGATCCGCG ACAGCGGCGC GTCGCTCGTC
GTGCTGCCCG AAGCCGTGCT CGGCGGCTAT CCGAAAGGCG AGAGCTTCGG CACGCGGCTC
GGCTACCGGT TGCCCGAAGG CCGCGACGCG TATGCGCGCT ACGCCGCGCA GGCGATCGAC
GTGCCGGGCC CCGAAACCGA CGAACTGGCC GCGCTGTCGC AGCGCACGGG CGCGAGCCTC
GTGGTCGGCG TGATCGAGCG CGGCGGCAGC ACGCTGTACT GCACGGCGCT GTTCTTCGAC
CCGCGCGACG GGCTCGTCGC GAAGCACCGC AAGCTGATGC CGACCGGCAC CGAGCGGCTG
ATCTGGGGGC AGGGCGACGG CTCGACGCTC CCGGTGGTCG ACACGGCCGC GGGCCGCGCG
GGGGCCGCGA TCTGCTGGGA GAACCACATG CCGCTGCTGC GCTGCGCGAT GTATGCGAAA
GGCGTGCAGA TCTGGTGCGC GCCGACCGTC GACGAGCGCG ACCTGTGGCA AAGCTCGATG
CGGCACATCG CGCACGAGGG GCGCTGCTTT GTCGTGAGCG CGTGCCAGGT GCAGCCGTCT
CCGCGCGCGC TCGGCATCGA CGTGCCGGGC TGGGATCCCG AGCGGCCGCT GATCCGCGGC
GGCAGCGTGA TCGTCGGGCC GCTCGGCGAC CTGCTGACGG AGCCGCTGAT CGGCGAGGCC
GGCCTCGTGA CCGCGCGCAT CGATACCGGC GAACTCGTGC GTGCGCGTTA CGACTTCGAC
GTGGTCGGGC ACTATGCGCG CGCCGACGTG TTTTCGCTGC ACGTCGACGA GCGGCCGAAG
CGGCCGGTGG TGTTCGAGGG CTGA
|
|---|
| Protein sequence | MSTSVIAALQ IGASPAGTRA TLDTILGYET AIRDSGASLV VLPEAVLGGY PKGESFGTRL
GYRLPEGRDA YARYAAQAID VPGPETDELA ALSQRTGASL VVGVIERGGS TLYCTALFFD
PRDGLVAKHR KLMPTGTERL IWGQGDGSTL PVVDTAAGRA GAAICWENHM PLLRCAMYAK
GVQIWCAPTV DERDLWQSSM RHIAHEGRCF VVSACQVQPS PRALGIDVPG WDPERPLIRG
GSVIVGPLGD LLTEPLIGEA GLVTARIDTG ELVRARYDFD VVGHYARADV FSLHVDERPK
RPVVFEG
|
|---|
| |