Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BamMC406_0610 |
Symbol | purH |
ID | 6177943 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia ambifaria MC40-6 |
Kingdom | Bacteria |
Replicon accession | NC_010551 |
Strand | - |
Start bp | 686319 |
End bp | 687884 |
Gene Length | 1566 bp |
Protein Length | 521 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 641680358 |
Product | bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase |
Protein accession | YP_001807323 |
Protein GI | 172059671 |
COG category | [F] Nucleotide transport and metabolism |
COG ID | [COG0138] AICAR transformylase/IMP cyclohydrolase PurH (only IMP cyclohydrolase domain in Aful) |
TIGRFAM ID | [TIGR00355] phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 0.951228 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 19 |
Fosmid unclonability p-value | 0.279266 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGATCAAGC AAGCGCTCAT TTCCGTTTCC GACAAGACCG GCATCGTCGA CTTCGCGAAG TCGCTGTCCG ACCTCGGCGT CAAGCTGCTG TCGACCGGCG GCACCGCGAA ACTCCTCGCC GACGCGGGCC TGCCCGTTAC CGAAGTGGCT GATTACACGG GCTTTCCGGA AATGCTCGAT GGGCGCGTGA AGACGCTCCA CCCGAAGGTG CACGGCGGCA TCCTCGCCCG CCGCGACCTG CCCGAGCACA TGCAGGCGCT GGAGCAGCAC GACATCCCGA CGATCGACCT GCTGGTCGTG AACCTGTATC CGTTCGTCGC GACGATCGCG AAGGACGACT GCACGCTCGC CGACGCGATC GAGAACATCG ACATCGGCGG CCCGACGATG CTGCGCTCGG CCGCGAAGAA CCACCGTGAC GTGACGGTCG TGGTCGATCC GGCCGACTAC GCGGTCGTGC TCGACGAAAT GAAGGCGAAC GGCAACGCGA TCGGCTACGC GACCAACTTC CGCCTCGCGA CGAAGGTGTT CGCGCACACC GCGCAGTACG ACGGCGCGAT CACGAACTAC CTGACGAGCC TGACCGACGA GCTGCAGCAC GCGTCGCGCA GCGCGTACCC GGCGACGCTG AACATGGCGT TCGACAAGGT GCAGGACCTG CGCTACGGCG AGAACCCGCA CCAGAGCGCC GCGTTCTACC GCGACCTCGC GGCGCCGGCC GGGGCACTGG CGAACTACCG CCAGCTGCAG GGCAAGGAGC TGTCGTACAA CAACATCGCG GATTCGGACG CGGCGTGGGA ATGCGTGAAG ACGTTCGACG CGCCGGCCTG CGTGATCATC AAGCATGCGA ACCCGTGCGG CGTCGCGGTC GGCAACGACT CGGCCGACGC ATACGCGAAG GCATTCCAGA CCGACCCGAC GTCGGCGTTC GGCGGCATCA TCGCGTTCAA CCGCGAAGTC GACGAGGCGG CCGCGCAGGC GGTGGCGAAG CAGTTCGTCG AAGTGCTGAT CGCGCCGTCG TTCTCCGACG CCGCGAAGCA GGTGTTCGCC GCGAAGCAGA ACGTGCGCCT GCTCGAGATC GCGCTGGGTG ACGGCCATAA CGCCTTCGAC CTGAAGCGCG TGGGCGGCGG CCTGCTCGTG CAGTCGCTCG ATTCGAAGAA CGTGCAGCCG AGCGAGCTGC GCGTCGTCAC GAAGCGCCAG CCGAGCGCGA AGGAAATGGA TGACCTGCTG TTCGCATGGC GCGTCGCGAA GTACGTGAAG TCGAACGCGA TCGTGTTCTG CGGCAACGGC ATGACGCTCG GCGTCGGCGC AGGCCAGATG AGCCGCGTCG ATTCCGCGCG CATCGCGAGC ATCAAGGCGC AGAACGCGGG CCTGACGCTG GCTGGCTCGG CCGTCGCGTC GGATGCGTTC TTCCCGTTCC GCGACGGTCT CGACGTCGTC GTGGCGGCAG GCGCGACCTG CGTGATCCAG CCGGGCGGTT CGATGCGCGA CGACGAAGTG ATCGCGGCAG CGGACGAGCA CGGCATCGCG ATGATCCTGA CGGGCGTGCG TCACTTCCGT CACTGA
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Protein sequence | MIKQALISVS DKTGIVDFAK SLSDLGVKLL STGGTAKLLA DAGLPVTEVA DYTGFPEMLD GRVKTLHPKV HGGILARRDL PEHMQALEQH DIPTIDLLVV NLYPFVATIA KDDCTLADAI ENIDIGGPTM LRSAAKNHRD VTVVVDPADY AVVLDEMKAN GNAIGYATNF RLATKVFAHT AQYDGAITNY LTSLTDELQH ASRSAYPATL NMAFDKVQDL RYGENPHQSA AFYRDLAAPA GALANYRQLQ GKELSYNNIA DSDAAWECVK TFDAPACVII KHANPCGVAV GNDSADAYAK AFQTDPTSAF GGIIAFNREV DEAAAQAVAK QFVEVLIAPS FSDAAKQVFA AKQNVRLLEI ALGDGHNAFD LKRVGGGLLV QSLDSKNVQP SELRVVTKRQ PSAKEMDDLL FAWRVAKYVK SNAIVFCGNG MTLGVGAGQM SRVDSARIAS IKAQNAGLTL AGSAVASDAF FPFRDGLDVV VAAGATCVIQ PGGSMRDDEV IAAADEHGIA MILTGVRHFR H
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