| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BamMC406_0607 |
|---|
| Symbol | ruvB |
|---|
| ID | 6177853 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia ambifaria MC40-6 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010551 |
|---|
| Strand | - |
|---|
| Start bp | 683688 |
|---|
| End bp | 684752 |
|---|
| Gene Length | 1065 bp |
|---|
| Protein Length | 354 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 641680355 |
|---|
| Product | Holliday junction DNA helicase RuvB |
|---|
| Protein accession | YP_001807320 |
|---|
| Protein GI | 172059668 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG2255] Holliday junction resolvasome, helicase subunit |
|---|
| TIGRFAM ID | [TIGR00635] Holliday junction DNA helicase, RuvB subunit |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 24 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 22 |
|---|
| Fosmid unclonability p-value | 0.655719 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGATTGAAA CCGACAAACT CGCCGCCGAG CGGATCATCG CCGCCACGCC ATCCTCGTCG
CACGAGGAGG TGTTCGAACG CGCGCTGCGG CCACGCCAGC TCGACGACTA CGTCGGCCAG
GAAAAAGTGC GCGGCCAGCT CGAGATCTTC ATCGAGGCCG CGAAGCGCCG CTCCGAGCCG
CTCGACCACG TGCTGCTGTT CGGGCCGCCG GGTCTCGGCA AGACCACCCT CGCTCACATC
ATCGCGCGCG AGATGGGCGT GAACCTGCGC CAGACGTCGG GCCCCGTGCT CGAGCGCGCG
GGCGACCTCG CCGCGCTGCT GACCAACCTC GAAGCGAACG ACGTGCTGTT CATCGACGAG
ATCCACCGGC TGTCGCCGGT CGTCGAGGAA ATCCTGTATC CGGCGCTGGA GGACTACCAG
ATCGACATCA TGATCGGCGA AGGGCCGGCC GCGCGCAGCG TGAAGCTCGA CCTGCAGCCG
TTCACGCTGG TCGGCGCGAC CACGCGTGCG GGGATGCTGA CCAACCCGCT GCGCGATCGC
TTCGGGATCG TCGCGCGCCT CGAGTTCTAC GATGCCGACC AATTGGCGCG CATCGTGCGG
CGCTCGGCGT CGCTGTTGAA CGCGCATATC GATCCGAGCG GCGCGCTGGA GATCGCGAAG
CGCTCGCGCG GCACACCGCG GATCGCGAAC CGGCTGCTGC GCCGCGTGCG CGACTTTGCG
GAAGTGAAAG CCGACGGCCA GATCACCGCG GCCGTTGCCG ACGCCGCGCT CGCGATGCTC
GACGTCGACC CGGTCGGCTT CGACCTGATG GACCGCAAGC TGCTCGAGGC TATCCTGCAC
AAGTTCGACG GTGGCCCGGT CGGCATCGAC AACCTCGCGG CGGCGATCGG GGAGGAACGC
GACACGATCG AGGACGTGCT CGAGCCGTAC CTGATTCAGC AGGGCTTCCT GCAGCGCACG
CCGCGCGGGC GCGTCGCGAC GCTGCTCACG TATCGCCATT TCGGACTCTC CGCGCCCGAC
GCCGGCAACG AACGCGGGAT GTGGGACACC CCCGCCGGAA AGTAG
|
|---|
| Protein sequence | MIETDKLAAE RIIAATPSSS HEEVFERALR PRQLDDYVGQ EKVRGQLEIF IEAAKRRSEP
LDHVLLFGPP GLGKTTLAHI IAREMGVNLR QTSGPVLERA GDLAALLTNL EANDVLFIDE
IHRLSPVVEE ILYPALEDYQ IDIMIGEGPA ARSVKLDLQP FTLVGATTRA GMLTNPLRDR
FGIVARLEFY DADQLARIVR RSASLLNAHI DPSGALEIAK RSRGTPRIAN RLLRRVRDFA
EVKADGQITA AVADAALAML DVDPVGFDLM DRKLLEAILH KFDGGPVGID NLAAAIGEER
DTIEDVLEPY LIQQGFLQRT PRGRVATLLT YRHFGLSAPD AGNERGMWDT PAGK
|
|---|
| |