| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BamMC406_0548 |
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| Symbol | araH |
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| ID | 6177873 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria MC40-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010551 |
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| Strand | + |
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| Start bp | 618395 |
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| End bp | 619411 |
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| Gene Length | 1017 bp |
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| Protein Length | 338 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 641680296 |
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| Product | L-arabinose transporter permease protein |
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| Protein accession | YP_001807261 |
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| Protein GI | 172059609 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1172] Ribose/xylose/arabinose/galactoside ABC-type transport systems, permease components |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.0287231 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 0.64831 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGCAAGTCC GGGAAAACCT CGCCAGCGCA GCCGTGAAGC CGTCGGCCGA CGCGCTGGTT
CCACAGCAGA GCGACCGCCA GAAGTGGTGG CAGCACCTCA CCGAATACAG CCTGATCGCG
ATCTTCGCGG TGATGTTCCT CACGATGTCG CTGACGGTCG ATCACTTCTT CTCGATCGAC
AACATGCTCG GCCTCGCGCT GTCGATCTCG CAGATCGGGA TGGTCGCGTG CACGATGATG
TTCTGTCTGG CCTCGCGCGA CTTCGACCTG TCGATCGGCT CGACCGTCGC GTTCTCCGGC
GTGCTGTGCG CGATGGTGCT GAACGCGACC GACAACACGT TCGTCGCGAT CATCGCGGCG
GTCGCCGCTG GTGCGGCGAT CGGGTTCGTG AACGGCGCGG TGATCGCGTA CCTGCGCATC
AACGCGCTGA TCACGACGCT CGCGACGATG GAAATCGTGC GCGGGCTCGG CTTCATCGTG
TCGAAGGGGC AGGCGGTCGG CGTGTCGTCG GACACCTTCA TCGCGCTCGG CGGGCTGTCG
CTGTTCGGCG TATCGCTGCC GATCTGGGTC ACGCTGCTGT GCTTCATCGT GTTCGGCGTG
CTGCTGAACC AGACCGTCTA CGGCCGCAAT ACGCTCGCGA TCGGCGGCAA CCCGGAGGCC
TCGCGCCTCG CGGGGATCAA CGTCGAGCGC ACGCGCGTCT ACATCTTCCT GATCCAGGGC
GCGGTCACGG CGCTCGCCGG GGTGATCCTC GCGTCGCGCA TCACGTCGGG CCAGCCGAAC
GCCGCGCAGG GCTTCGAGCT GAACGTGATC TCCGCATGCG TGCTCGGCGG CGTGTCGCTG
ATGGGCGGCC GCGCGACGAT CTCGGGCGTC GTGATCGGCG TGCTGATCAT GGGTACCGTC
GAGAACGTGA TGAACCTGAT GAACATCGAC GCGTTCTACC AGTACCTGGT GCGCGGCGCG
ATCCTGCTCG CGGCCGTGCT GCTCGACCAG CTGAAGAACC GCGGCGTACG CGACTGA
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| Protein sequence | MQVRENLASA AVKPSADALV PQQSDRQKWW QHLTEYSLIA IFAVMFLTMS LTVDHFFSID
NMLGLALSIS QIGMVACTMM FCLASRDFDL SIGSTVAFSG VLCAMVLNAT DNTFVAIIAA
VAAGAAIGFV NGAVIAYLRI NALITTLATM EIVRGLGFIV SKGQAVGVSS DTFIALGGLS
LFGVSLPIWV TLLCFIVFGV LLNQTVYGRN TLAIGGNPEA SRLAGINVER TRVYIFLIQG
AVTALAGVIL ASRITSGQPN AAQGFELNVI SACVLGGVSL MGGRATISGV VIGVLIMGTV
ENVMNLMNID AFYQYLVRGA ILLAAVLLDQ LKNRGVRD
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