Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BamMC406_0523 |
Symbol | |
ID | 6177108 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia ambifaria MC40-6 |
Kingdom | Bacteria |
Replicon accession | NC_010551 |
Strand | + |
Start bp | 592554 |
End bp | 593765 |
Gene Length | 1212 bp |
Protein Length | 403 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 641680271 |
Product | ribonucleotide-diphosphate reductase subunit beta |
Protein accession | YP_001807236 |
Protein GI | 172059584 |
COG category | [F] Nucleotide transport and metabolism |
COG ID | [COG0208] Ribonucleotide reductase, beta subunit |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 29 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 18 |
Fosmid unclonability p-value | 0.165447 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCTCAACT GGGATGACGA GAAGACTGCC GTAACCCCCG CGAGCGGAGC GCAGCAGAAC GCGTTGCGCA CCTCCGCTGG GATGGCTGTC GGACTGCAGG CGACAGCGCC TGCCGCCCAT CAGGTCCGCG ACATTTTCGA AGGCGATCTC GCGGTGCCGC CGCAAGCATC GGCTGTTCCC GCTGCGGGTT CGGAAGCGCG GGTCAACGTT GCGGACAAGC GCATCATCAA CGGCCAGACT GACGTCAATC AGCTGGTGCC GTTCAAGTAC AAGTGGGCGT GGGAAAAGTA TCTGGCCGGT TGCGCGAACC ACTGGATGCC GCAGGAAATC AACATGTCCC GCGACATCGC ACTGTGGAAG GACCCGAACG GTCTGACCGA GGACGAGCGC CGCATCGTCA AGCGCAACCT CGGCTTCTTC GTGACGGCCG ATTCGCTCGC CGCGAACAAC ATCGTGCTCG GCACGTACCG CCACATCACG GCGCCCGAGT GCCGGCAGTT CCTGCTGCGC CAGGCGTTCG AAGAGGCGAT CCACACGCAC GCGTATCAAT ACATTGTCGA ATCGCTCGGT CTCGACGAAG GCGAGATCTT CAACGCGTAC CACGAGGTCA CGTCGATCCG CGCGAAGGAC GAATTCCTGA TCCCGTTCAT TCACACGCTG ACGGATCCGG CCTTCAAGAC CGGCACGCTC GAAGCGGACC AGAAGCTGCT GAAGTCGCTG ATCGTGTTCG CCTGCATCAT GGAAGGCCTG TTCTTCTATG TCGGCTTCAC GCAGATCCTC GCGCTCGGCC GCCAGAACAA GATGACGGGT GCTGCAGAGC AATATCAGTA CATCCTGCGC GACGAGTCGA TGCACTGCAA TTTCGGCATC GACCTGATCA ATCAGATCAA GCTCGAGAAC CCGCATCTCT GGACCGCGGA ATTCCGCGCT GAGATCCGCG AGCTGTTCAA GCAGGCTGTC GAACTCGAAT ACCGCTACGC CGAGGACACG ATGCCGCGCG GCGTGCTGGG TCTGAACGCG TCGATGTTCA AGAGCTATCT GCGCTTCATC AGCAACCGCC GTTGCCAGCA GATCGGCCTC GACCCGCTGT ATCCGAACGA GGAAAACCCG TTCCCGTGGA TGAGCGAGAT GATCGACCTG AAGAAGGAAC GCAACTTCTT CGAGACGCGT GTGATCGAGT ATCAGACGGG CGGCGCGCTG TCCTGGGAAT AA
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Protein sequence | MLNWDDEKTA VTPASGAQQN ALRTSAGMAV GLQATAPAAH QVRDIFEGDL AVPPQASAVP AAGSEARVNV ADKRIINGQT DVNQLVPFKY KWAWEKYLAG CANHWMPQEI NMSRDIALWK DPNGLTEDER RIVKRNLGFF VTADSLAANN IVLGTYRHIT APECRQFLLR QAFEEAIHTH AYQYIVESLG LDEGEIFNAY HEVTSIRAKD EFLIPFIHTL TDPAFKTGTL EADQKLLKSL IVFACIMEGL FFYVGFTQIL ALGRQNKMTG AAEQYQYILR DESMHCNFGI DLINQIKLEN PHLWTAEFRA EIRELFKQAV ELEYRYAEDT MPRGVLGLNA SMFKSYLRFI SNRRCQQIGL DPLYPNEENP FPWMSEMIDL KKERNFFETR VIEYQTGGAL SWE
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