Gene BamMC406_0509 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBamMC406_0509 
SymbolrplU 
ID6177885 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia ambifaria MC40-6 
KingdomBacteria 
Replicon accessionNC_010551 
Strand
Start bp577646 
End bp577957 
Gene Length312 bp 
Protein Length103 aa 
Translation table11 
GC content56% 
IMG OID641680257 
Product50S ribosomal protein L21 
Protein accessionYP_001807222 
Protein GI172059570 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0261] Ribosomal protein L21 
TIGRFAM ID[TIGR00061] ribosomal protein L21 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.00322629 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value0.760659 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTACGCGG TCATAAAAAC CGGCGGCAAG CAGTACAAGG TTGCCGTTGG CGAAAAACTC 
AAAGTAGAAC AGATACCGGC TGACATTGAC GCTGAAATCA CGCTCGACCA GGTTCTCGCA
GTGGGCGAAG GCGAATCGAT TAAGTTCGGT ACGCCGCTGG TCAGTGGGGC TTCCGTCAAG
GCCACCGTTG TGTCGCACGG TCGTCATGCC AAGGTCACCA TCTTCAAGAT GCGTCGCCGG
AAGCACTACC AAAAGCACGG CGGCCACCGC CAGAACTACA CTGAGCTGCG CATCGACGCG
ATCAACGCGT AA
 
Protein sequence
MYAVIKTGGK QYKVAVGEKL KVEQIPADID AEITLDQVLA VGEGESIKFG TPLVSGASVK 
ATVVSHGRHA KVTIFKMRRR KHYQKHGGHR QNYTELRIDA INA