| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BamMC406_0504 |
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| Symbol | |
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| ID | 6178490 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria MC40-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010551 |
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| Strand | - |
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| Start bp | 571251 |
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| End bp | 572162 |
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| Gene Length | 912 bp |
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| Protein Length | 303 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 641680251 |
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| Product | prepilin peptidase |
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| Protein accession | YP_001807217 |
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| Protein GI | 172059565 |
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| COG category | [N] Cell motility
[O] Posttranslational modification, protein turnover, chaperones
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG1989] Type II secretory pathway, prepilin signal peptidase PulO and related peptidases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 0.613081 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 0.615675 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACGCCCG CGCCCCTGAC CACCGTTTTC GATTCGCCCG ACAGCACGTT GCTCGCGCTG
GCAATGCTGC CGCCCGCGGT GCAGTATGCA TTCGCCGTCG TGCTTGGGCT GTGCGTCGGC
AGCTTCGTGA ACGTCGTCGC GCACCGGATC CCGGTGATGA TGCAGCGCGC ATGGCAGGCC
GAAATCGCCG AAGCGACCGG CAGCGCGAGC GCGGCGCCCG ACGACGGCTA TCCGCCGCAC
TACGATCTGT GGCGCCCGCG CAGCGCCTGT CCGCACTGCG GCCACGTGCT GCGCGCGTGG
GAAAACATCC CGCTCGTCAG CTACCTGATG TTGCGCGGGC GCTGCCGCCA GTGCGGTCAT
GCGATCGGCG TGCGCTATCC GCTCGTCGAG GTCGCGGGCG CGCTGCTCGC CGCCGGCTCG
CTCGCCGTGT TCGGCCCGAC CGCCGCCGCA CTCGCCGCGT TCGGGCTCTG CGCCGCGCTG
TTGGCGATGA GCGCGATCGA CATCCAGACC GGCTACCTTC CCGATTCGAT GACGCTGCCG
CTGCTGTGGG CAGGGCTCGC ACTGAACCTC GGCGGCACGT TCACGTCGCT GCGTTCGGCC
GTGGTCGGCG CAATGGCCGG GTACCTGTTC CTGTGGTCGA TCTACTGGCT GTTCAAATGG
CTGCGCGGCA TCGAGGGCAT CGGCTTCGGC GACCTGAAGC TGCTCGCCGC GCTCGGCGCA
TGGATGGGCT GGGCCGCGCT GCCGCAGGTC GTGCTGTTCG CCGCGGTGAC GGGCGCGGTC
GTCGGGCTCG TCGCGACCTG GCGCGGACGC ATGCGCTTCG AGGAGCCGAT TCCGTTCGGC
CCGTTCCTCG CGGCAGGCGG CGTCGCGACG CTGTTTTTCG GCACCCCTTT CTATCTGGCG
CTCGGCGGCT GA
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| Protein sequence | MTPAPLTTVF DSPDSTLLAL AMLPPAVQYA FAVVLGLCVG SFVNVVAHRI PVMMQRAWQA
EIAEATGSAS AAPDDGYPPH YDLWRPRSAC PHCGHVLRAW ENIPLVSYLM LRGRCRQCGH
AIGVRYPLVE VAGALLAAGS LAVFGPTAAA LAAFGLCAAL LAMSAIDIQT GYLPDSMTLP
LLWAGLALNL GGTFTSLRSA VVGAMAGYLF LWSIYWLFKW LRGIEGIGFG DLKLLAALGA
WMGWAALPQV VLFAAVTGAV VGLVATWRGR MRFEEPIPFG PFLAAGGVAT LFFGTPFYLA
LGG
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