| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BamMC406_0460 |
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| Symbol | trpC |
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| ID | 6177646 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria MC40-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010551 |
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| Strand | - |
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| Start bp | 516714 |
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| End bp | 517499 |
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| Gene Length | 786 bp |
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| Protein Length | 261 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 641680202 |
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| Product | indole-3-glycerol-phosphate synthase |
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| Protein accession | YP_001807173 |
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| Protein GI | 172059521 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0134] Indole-3-glycerol phosphate synthase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 32 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 0.212838 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGAGCGACA TTCTCGACCG AATCATTGCC GTCAAGCGCG AAGAAGTCGC GGCGGCCATG
CGCAGCGCGC CGCTCGAGGC ACTGAAACTG GAAGCATCGG CGCGCGACCT GCGCGACTTC
GTCGGCGCAC TGCGCGCGAA GCAGGCGGCC GGCCACGCGG CGGTGATTGC CGAAGTGAAG
AAGGCGAGCC CGTCGAAGGG CGTGCTGCGC GAGCATTTCG TGCCCGCCGA CATCGCACGC
TCGTATGCAG CCCACGGCGC CGCGTGCCTG TCGGTGCTGA CCGACGAGCA GTTCTTCCAG
GGCAGCGTCC GCTACCTCGA GGAAGCCCGT GCGGCCTGCA CGCTGCCGGT GCTGCGCAAG
GACTTCATCG TCGATGCGTA CCAGATCCTC GAAGCGCGCG CGATGGGCGC CGACGCGATC
CTGCTGATCG CGGCCGCGCT CGACACGCCG CTGATGCAGG ACCTCGAGGC ATATGCGCAC
TCGCTCGGCC TCGCGGTGCT GGTCGAAGTC CACGACCGCG ACGAGATGGA ACAGGCGCTG
ACGCTGAAGA CACCGCTGCT CGGCATCAAC AATCGCAACC TGCGCACGTT CGAGACGTCG
ATCCAGACCA CGCTCGACAT GCTCGACATG ATTCCGCCGG AACGGATGGT CGTGACCGAA
TCGGGCATCC TGTCGCGCAC CGACGTCGAC ACGATGCGCG CGGCGAACGT GAACGCGTTC
CTCGTCGGCG AAGCGTTCAT GCGCGCCGAC CAGCCGGGCG AGGAACTCGC GCGGATGTTC
TTCTGA
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| Protein sequence | MSDILDRIIA VKREEVAAAM RSAPLEALKL EASARDLRDF VGALRAKQAA GHAAVIAEVK
KASPSKGVLR EHFVPADIAR SYAAHGAACL SVLTDEQFFQ GSVRYLEEAR AACTLPVLRK
DFIVDAYQIL EARAMGADAI LLIAAALDTP LMQDLEAYAH SLGLAVLVEV HDRDEMEQAL
TLKTPLLGIN NRNLRTFETS IQTTLDMLDM IPPERMVVTE SGILSRTDVD TMRAANVNAF
LVGEAFMRAD QPGEELARMF F
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