Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BamMC406_0458 |
Symbol | |
ID | 6176295 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia ambifaria MC40-6 |
Kingdom | Bacteria |
Replicon accession | NC_010551 |
Strand | - |
Start bp | 515160 |
End bp | 516074 |
Gene Length | 915 bp |
Protein Length | 304 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 641680200 |
Product | uracil-DNA glycosylase |
Protein accession | YP_001807171 |
Protein GI | 172059519 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0692] Uracil DNA glycosylase |
TIGRFAM ID | [TIGR00628] uracil-DNA glycosylase |
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Plasmid Coverage information |
Num covering plasmid clones | 32 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 19 |
Fosmid unclonability p-value | 0.22898 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCAACCC GCAAGACTCT CCGCACGCCG CAGCAGGCGT CGCTGTTCGA CGATCCCGTG CCGGAAACGG CGCAGGACGA TGTTTCCGCC ACGGCGCCCG CGCCGGCCGC TGCCGGGCGC AAGCCCGCAA GGAAGGCCGC GGCAGCCGCC CCGATTTCCG CCGCGCCGCA GCCCGCGCGC CCCGTTGTCG CGAACATTCC TCACCTCGCC GCGCAGTTCG ACGCGCTGCC GGCCGCCTGG CGCGACGTGT TGAAACCGTT CACCGACAGC GACGCGTATG CGCCGCTGTG CCGCTTCGTC GACGACGAGC GCGCGGCCGG CAAGACGGTC TACCCGACCG ACGTGTTTCG CGCGCTGCGC CTGACGAGCC CGGACGACGT GAAGATCGTG ATTCTCGGCC AGGATCCCTA CCACGGCGAC GATCGCGGCA CACCGCAGGC GCACGGCCTG GCGTTCTCGG TGCCGCCGGC CGTCCGCACG CCGCCGTCGC TGCGCAACAT CTTCAAGGAA ATCGCCGCGA ATTTCGGCCA CGACACGCCG CGTCACGGCT GCCTCGACAC CTGGGCGCGC CAGGGCGTGC TGCTGCTCAA CACCGTGCTG ACGGTCGAGC GCGGCGCGGC TGCGAGCCAC GCAAAGCGCG GCTGGGAGCA ATGCACGGAC ACGCTGATCC GCGAACTGGC CAATCGCCAT CGCGGGCTCG TGTTCATGCT GTGGGGCGCG CACGCGCAAG CGAAGCGCGC GCTGTTCGAT GCGAGCGCCC ACTGTGTGCT CGAGGCGCCG CATCCGTCAC CGCTGTCCGC GCACCGCGGC TTCCTCGGTT GCCGCCACTT CGCGCTCGCG AACGACTATC TCGTCGAAGC GGGCCGCGAG CCGGTCGACT GGCGCTTGCC GGAAGTGGCC GAAACGCTCG CGTAA
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Protein sequence | MATRKTLRTP QQASLFDDPV PETAQDDVSA TAPAPAAAGR KPARKAAAAA PISAAPQPAR PVVANIPHLA AQFDALPAAW RDVLKPFTDS DAYAPLCRFV DDERAAGKTV YPTDVFRALR LTSPDDVKIV ILGQDPYHGD DRGTPQAHGL AFSVPPAVRT PPSLRNIFKE IAANFGHDTP RHGCLDTWAR QGVLLLNTVL TVERGAAASH AKRGWEQCTD TLIRELANRH RGLVFMLWGA HAQAKRALFD ASAHCVLEAP HPSPLSAHRG FLGCRHFALA NDYLVEAGRE PVDWRLPEVA ETLA
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