Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BamMC406_0432 |
Symbol | |
ID | 6178953 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia ambifaria MC40-6 |
Kingdom | Bacteria |
Replicon accession | NC_010551 |
Strand | + |
Start bp | 487713 |
End bp | 488318 |
Gene Length | 606 bp |
Protein Length | 201 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 641680174 |
Product | nitroreductase |
Protein accession | YP_001807145 |
Protein GI | 172059493 |
COG category | [C] Energy production and conversion |
COG ID | [COG0778] Nitroreductase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 0.181342 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 20 |
Fosmid unclonability p-value | 0.330733 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCTGTCA AACCTGCTCC CACCACTGTT TCGATTCACG ACCTGATCGC GGGCCGCTGG AGCCCGCGCG CGTATTCGGA CGAGCCGATC AGCGCCGCCG ATCTGCACGC GGTGCTCGAA GCCGCGCGCT GGGCGCCGTC CGCGTACAAC GCGCAGCCGT GGCGCTTCAT CGTGTTCGAT CGCACGCGGG ACGAAGCGGC GTTCAAGCGC GCATTCGCGA CGCTGGTGCC GTTCAATCAG GCGTGGAACG CGCCGGCGCC GGTGCTGATC GCCGTGACTT CGCACACGCT CACGCCGAAG GGCGAGCCGG CGTCGACCGC GCTGTACGAC GCGGGCGCCG CCGCGATGTC GCTGGTGCTG CAGGCGCACG CGCTGGGCCT GGCTGCCCAC CAGATGAGCG GCTTCGACGC GAAGGCGTTC CGCGACGCGT TCGAGATTCC GGCCGACGTC GCCATTCCGG CGCTCATCTC GCTCGGCCAC TACGGCAACG TCGACAAGCT CGATCCGGTG CTGCGCGACC GCGAAAAGGC GCCCCGCACG CGCCATGCGC TCGGCGAGGT CGTCTATGCG GGCGCATGGA AGAAGGGTTT CGAAGCGGCA GCCTGA
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Protein sequence | MSVKPAPTTV SIHDLIAGRW SPRAYSDEPI SAADLHAVLE AARWAPSAYN AQPWRFIVFD RTRDEAAFKR AFATLVPFNQ AWNAPAPVLI AVTSHTLTPK GEPASTALYD AGAAAMSLVL QAHALGLAAH QMSGFDAKAF RDAFEIPADV AIPALISLGH YGNVDKLDPV LRDREKAPRT RHALGEVVYA GAWKKGFEAA A
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