Gene BamMC406_0416 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBamMC406_0416 
Symbol 
ID6178390 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia ambifaria MC40-6 
KingdomBacteria 
Replicon accessionNC_010551 
Strand
Start bp467739 
End bp468674 
Gene Length936 bp 
Protein Length311 aa 
Translation table11 
GC content57% 
IMG OID641680158 
Producthypothetical protein 
Protein accessionYP_001807129 
Protein GI172059477 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value0.785538 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAAAGAC TGCCGATGCC TGATTTGATA CAACCGGCTG CTCAAACATG CATAGCGGCC 
GCTCCTCGCT ATCGAGACAC CCGTCGGACC GGCGAACGAT TGTCGACTGC GCTGCGAGTC
GCTGCCGCAA GCATGATGTT CGTCTCGATA GCTGCGTGCA GCAAGACCGA ACCTACGTAC
ACCAGCGTTT CAACGGAGGC CCTGAACTAC TTGCCGTATA ACCTGGTTCG ATTCACGATC
ACTGATCAAT TCGGCAACAA GGCACGTGGT GGTGGCGATC TGGAACCCGG CACCGGTGAA
GGCAGCATCA CCTGCTGTTA CCTGCTGAAA GGAACCGAAT TCAAGGTTCA GTGGATTTAT
TACGACGCGG ACGATTGGCG GCCGGGAGAG CAGGTAAAGA AGCAGCAGGG CGAGACGAGC
GTGTCGTTGC CGCCGGCCGC GGTGCCCGAT TCAATCGGTT CACGCATTCT CGAAGTGCAT
TTCTATCCGG ACCGCCATGT CGAACTGTCC TTTCCTGGCC AGATATTGGG AAGTACGCGA
TTGCCGATCG TGGACGTGTC ACGCGACCTG ACGAAACGTT ACGCAAACCG GCTGGAAAAG
AGGTATGAGG ACAATGACGC GCAGCTGCAC CGTCGCATTT CGAGAGTTGT CGCGCAAGCA
TGGCTCAAGT ACCGCTTTAC CAACCGCAGT GATCTCGAGC AATACGCGTA TTACGTGCTG
CTGGTGAATC CGCGGTTCGA TGCGCACCCC GAGGTGCACA AGCTGATCAA GTCGTGCAAA
GGGAAGCCGG GAGCATTCGC GAAGGCGGTT GCAACCCTGC CCGCTGCTGT TACGAAGGAG
CTCGGGACCG ACCGGTTTCA AGCAGTTTCG GTGCCGCCGA TTGCGACAGG GCTATTGCCA
GCATCACGAG AGGAGAATGG GCACGGCCGG ACCTAA
 
Protein sequence
MQRLPMPDLI QPAAQTCIAA APRYRDTRRT GERLSTALRV AAASMMFVSI AACSKTEPTY 
TSVSTEALNY LPYNLVRFTI TDQFGNKARG GGDLEPGTGE GSITCCYLLK GTEFKVQWIY
YDADDWRPGE QVKKQQGETS VSLPPAAVPD SIGSRILEVH FYPDRHVELS FPGQILGSTR
LPIVDVSRDL TKRYANRLEK RYEDNDAQLH RRISRVVAQA WLKYRFTNRS DLEQYAYYVL
LVNPRFDAHP EVHKLIKSCK GKPGAFAKAV ATLPAAVTKE LGTDRFQAVS VPPIATGLLP
ASREENGHGR T