| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BamMC406_0408 |
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| Symbol | |
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| ID | 6177634 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria MC40-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010551 |
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| Strand | + |
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| Start bp | 456616 |
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| End bp | 459285 |
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| Gene Length | 2670 bp |
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| Protein Length | 889 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 641680150 |
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| Product | type VI secretion ATPase |
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| Protein accession | YP_001807121 |
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| Protein GI | 172059469 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0542] ATPases with chaperone activity, ATP-binding subunit |
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| TIGRFAM ID | [TIGR03345] type VI secretion ATPase, ClpV1 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 24 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCACGC CTCTGAAGAC CCTGATCACG AAACTGAACC CGCTGTGCCG GCACGCGACC
GAGCGTGCGG CGAGCGCGTG CCTGGCGCGC GGCCATTACG AGGTCGATCT GGAGCACCTG
TTCCTCGCGC TGCTCGACGA AGCGACGGGC GACCTGCCGC TCGCGCTGCG CGCAAGCCGC
GTCGATCCGC ATGCGCTGCG TGCCGATCTC GAGCGCGAGC TCACGCGGCT GAAGACGGGC
AACACGCGCA CGCCGGTGTT CTCCGTGCAT CTGATCGCGC TGTTCGAGCA GGCGTGGCTG
ATCGCGTCGC TCGATTCGCA GCTCGGCCGC ATCCGCTCGG GGCACCTGCT GCTCGCGCTG
CTGACCGCGC CCGATCTCGC GCAGTTCGCG CAGCGCATGT CGCCGCAGTT CGCGGAAATG
AACGTGACGG ACCTGAAGCA CAAGTTCGAC GAGATCATGG GCGGCTCGAG CGAGGCCGAG
CCGCGCCAGC CGGATGCGGA AGACGGCGAC GTCGCGCCGG CTGCCAACGG CGCCGCGCCC
GCGGCCGGCC CGTCGAAGAC GCCCGCGCTC GACACGTACA CGACCAACCT CACCCAGCGT
GCGCGCGACG GCAAGATCGA TCCGGTGATC GGTCGCGAAG CGGAGATCCG CCAGGCGATC
GACATCCTGA TGCGCCGCCG CCAGAACAAC CCGATCATGA CCGGCGAGGC CGGCGTCGGC
AAAACGGCGG TCGTCGAGGG TCTCGCGTTG CGGATCGCGG CCGACGACGT GCCGCCGCCG
CTCTCCGGCG TCGCGCTGCA CGTGCTCGAC ATGGGCCTGC TGCAGGCCGG CGCGAGCGTG
AAGGGCGAGT TCGAGAACCG TCTGAAGAGC GTGATCGACG AGGTGAAGAA GAGCGCGCAT
CCGATCATCC TGTTCATCGA CGAGGCACAC ACGATCATCG GCGCGGGCGG CCAGGCCGGC
CAGAACGACG CGGCGAACCT GCTGAAACCG GCGCTCGCGC GCGGCGAGCT GCGCACGATC
GCCGCGACGA CGTGGAGCGA ATACAAGAAG TACTTCGAGA AGGATGCGGC GCTGGCGCGG
CGTTTCCAGG TCGTGAAGGT CGAGGAGCCG AGCGAGCCGC TCGCGGCCGC GATGCTGCGC
GGGATGTCCG GGCTGATGGA GAAGCACTTC AACGTGCGGA TCCTCGACGA CGCGATCACC
GAGGCGGTGC GCCTGTCGCA TCGCTACATC AGCGGCCGCC AGCTGCCGGA CAAGGCGATC
AGCGTGCTCG ACACCGCGTG CGCGAAGGTC GCGCTCGCGC ACAGCGCGAC GCCGGCGGCG
ATCGACGACA CGAAAAAGCG CATCGAGCGC ATCGACGCGG AAATCGCGTC GCTGGAGCGC
GAATCGGCGG GCGGCGCGTC GCACGACGAG CGGCTCGGCG AGCTGCGCGG CGCGCGCGAC
ACGGCGCTCG CGCAATTGGC AGAGAACGAA GCGCGCTATG AAGCCGAGCG CGTGATCGTC
GCCGAGATCA CCGAACTGCG CGACACGCTC GACAAGGCGC GCGGCCCGTC GGAAGACGGC
GAGCCGGTCG ACGTGCCGGC CACCCGCGAG AAGCTGGCCG AGCGCGTCGC TGCGCTGCAC
GCGCTGCAGG GCGGTGAGCC GATGGTGCCG CTGCAGGTCG ACGGCCACGT CGTCGCCGAG
ATCGTCGCCG CGTGGACCGG CATTCCGCTC GGCCGGATGG TGAAGGACGA GATCGACACC
GTGCTGAACC TGCAGCCGCT GCTGGGCGCG CGCGTGATCG GCCAGGACCA TGCGCTGGAT
GCGATCGCGC AGCGCGTGCG CACGGCGACC GCGAACCTCG AGGATCCGAA CAAGCCGCGC
GGCGTGTTCA TGTTCGTCGG GCCGTCGGGC GTCGGCAAGA CCGAGACGGC GCTCGCGCTG
GCAGACATCC TGTACGGCGG CGAGCGCAAG ATGGTCACGA TCAACATGAG CGAGTACCAG
GAAGCGCACA GCGTGTCGGG CCTGAAGGGT TCGCCGCCGG GCTACGTCGG CTACGGCGAA
GGTGGCGTGC TGACCGAGGC CGTGCGCCGC AACCCGTATT CCGTCGTGCT GCTCGACGAG
GTCGAGAAGG CGCACCCGGA CGTGCTCGAG ATGTTCTTCC AGGTGTTCGA CAAGGGCACG
ATGGACGACG CCGAAGGGCG CGAGATCGAC TTCCGCAACA CGCTGATCAT CCTGACGTCG
AACGTCGGGT CGGCCGCTGT GATGCAGGCG TGCCTGAACA AGCCGGCCGA GGAGCTGCCC
GATCCGGACG CGCTCGCCGA GGCGCTGCGC CCGCAGCTGT ACAAGACGTT CAAGCCCGCG
TTCCTCGGTC GGATGAAGGT CGTGCCGTAC TACCCGATTT CCGACGACGT GCTGGCCGAG
ATCATCGAGC TGAAGCTCGA ACGGATCCGC CGCCGCATCG ACGCGAACCA CAAGGCCGCG
TTCGAGTGGG ACGAATCGCT CGTCGATGCG GTGCTCGCGC GCTGCACCGA GGTCGACTCG
GGCGCCCGCA ACGTCGACCA CATCCTGAAC GGCACGCTGC TGCCGGAGAT CGCGGGCCAC
GTGCTCGGCC GGATCGCCGA CGGCGCGGCC ATCGCGCGCA TCGCGGTGCG CGCGGACGAG
GCCGGCGAAT TCGCTTACAC CGTCGAATGA
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| Protein sequence | MSTPLKTLIT KLNPLCRHAT ERAASACLAR GHYEVDLEHL FLALLDEATG DLPLALRASR
VDPHALRADL ERELTRLKTG NTRTPVFSVH LIALFEQAWL IASLDSQLGR IRSGHLLLAL
LTAPDLAQFA QRMSPQFAEM NVTDLKHKFD EIMGGSSEAE PRQPDAEDGD VAPAANGAAP
AAGPSKTPAL DTYTTNLTQR ARDGKIDPVI GREAEIRQAI DILMRRRQNN PIMTGEAGVG
KTAVVEGLAL RIAADDVPPP LSGVALHVLD MGLLQAGASV KGEFENRLKS VIDEVKKSAH
PIILFIDEAH TIIGAGGQAG QNDAANLLKP ALARGELRTI AATTWSEYKK YFEKDAALAR
RFQVVKVEEP SEPLAAAMLR GMSGLMEKHF NVRILDDAIT EAVRLSHRYI SGRQLPDKAI
SVLDTACAKV ALAHSATPAA IDDTKKRIER IDAEIASLER ESAGGASHDE RLGELRGARD
TALAQLAENE ARYEAERVIV AEITELRDTL DKARGPSEDG EPVDVPATRE KLAERVAALH
ALQGGEPMVP LQVDGHVVAE IVAAWTGIPL GRMVKDEIDT VLNLQPLLGA RVIGQDHALD
AIAQRVRTAT ANLEDPNKPR GVFMFVGPSG VGKTETALAL ADILYGGERK MVTINMSEYQ
EAHSVSGLKG SPPGYVGYGE GGVLTEAVRR NPYSVVLLDE VEKAHPDVLE MFFQVFDKGT
MDDAEGREID FRNTLIILTS NVGSAAVMQA CLNKPAEELP DPDALAEALR PQLYKTFKPA
FLGRMKVVPY YPISDDVLAE IIELKLERIR RRIDANHKAA FEWDESLVDA VLARCTEVDS
GARNVDHILN GTLLPEIAGH VLGRIADGAA IARIAVRADE AGEFAYTVE
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