| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BamMC406_0375 |
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| Symbol | |
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| ID | 6178165 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria MC40-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010551 |
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| Strand | + |
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| Start bp | 413701 |
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| End bp | 415407 |
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| Gene Length | 1707 bp |
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| Protein Length | 568 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 641680121 |
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| Product | polypeptide-transport-associated domain-containing protein |
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| Protein accession | YP_001807092 |
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| Protein GI | 172059440 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG2831] Hemolysin activation/secretion protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 0.716878 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGAAGAAAC GAGAAACTTC GGCAGCGTTG ATTTCGGCGT TGGCGAGTGT TTCGGCATTC
GCGCAAGGCG TTCCGCCGTC CGAGATCACG TCTGGCCCGC AAATCCAGCG TTTGCAACAA
CAGCAATTGG ACGCGACGAA GGAATTGAAT CCTCGTCCGA CAGTCCTGAC ACCCACGGGC
GAGAAGGCAT CGACAACCGG CGTCGAAAGC CTGCCGCTCG ATGACCCGTG CTTTCCGATC
AAGGCAATCG CATTGGAAGA CAATGCGTTC GCGTGGCTTG CGCGCTTTCT GCAACCGGTC
GTCGGTCAGT GCGCCGGCAA GACCGCACTC AAGCAGATTC AGGACGCTGC CAATAACGCA
TTGATCGACC GCGGCTACGT GACGTCACGT GTGCTCGTGC CGGCGCAATC GCTGCAATCC
GGAACGTTGA CGCTTCGCGT GGTTCCGGGG CGGATCAGCG ACATTCGCAC CGGCAAACCG
GCGATCGGTT GGGCGCGTAC GGCGCTGCCG ACATCGGCGG GCGTGTTGCT GAATCAGCGC
GACATCGACC AGGGGCTCGA GAACGTGCGT CGTCTCCAAT CGCAGTCCGA TGCGACATTC
GACATCGCAC CCGGCATGAA TCCGGGGGAC TCGGAGCTGG TATTTCATCC CGGCACTGGC
AAGCGCTGGC ATGCCGTCAT CGGCGCGGAC AACGCAGGTC TCGATGCGAC CGGCAAGTAC
GAGCTGTCCG GCTCGTTCAC GTTCGATTCC CCGTTTCACT TGTACGATCA ACTGCAGATC
GCAGGCACGA CGAACGCAAA CATTGGCGCA TCCGAGAAGG GTAACCAGTC TGTCTCCGCG
AACTACAGCG TGCCGATCGG TTACGCGATG CTGACGCTGA ACGCGAGCCG CTCGCGGTAC
AAGCAGACGG TCGCGGGTTT TGGCGAGCCG ATCGAATACA GCGGTGTCCA GTCTCAACTC
CAGGCCGGGC TGTCCGGTGT GATCTATCGG AACGCGCATG CGCGCACCGA GATTCACGGC
AACCTGTTCC ACAAGATCAG CCGCAACTCG ATCGACGGCG TCGATATTCC GGTGCAGCAC
CGCGACATCA TCGGTTACGA ACTGGGTGTC GCGCATCGCC AGTACATCGG CGATGTCGTG
CTCGACGGCT CATTCGCGTG GCGCGCATCG TTGCCGGGCC TCTCCAGCAA TTCGGGCACG
GTGGTCGGCA CCCCCGACTT CGACGGCAAG ACGCAGGTCG AACTGGCAAG CCTCAGCGCT
CAAGTTCCTT TCAGGATCGG CAGCCAGACG TTCTCGTACC AGTTCGGCTG GAACATGCAG
AACGCACGTA CGCCGCTCAC TCCTTCCGAC TATTTCACGA TCGGCACGCG TTACGCCGTG
CGCGGCTTCG ATCAGCAACT GACGCTTGCC GCCGAGAGCG GCTGGGTGGT TTCCAACGAA
CTCGACTGGT ACGTACCGAC GCCTGTCGGC ACGCAGGCGC TCTATGCCGG CGTCGATGCG
GGGCGCGTGC GAGGACCAGC CGCGCAATAC CTGCTCGGCG AAACGCTGGT CGGCGCCGTC
GTCGGTGTGC GCGGCAATCT CGCCCCGAAG AACGTGCTCG GTGCTGCGCT GAACTACGAC
GTATCGCTCG GATTCCCGTT GTCGAAGCCG GAAGGGTTCA AGACGAGTTC GCCGACGTTG
CTGTTCCAGG TCAGCACATT GTTCTAA
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| Protein sequence | MKKRETSAAL ISALASVSAF AQGVPPSEIT SGPQIQRLQQ QQLDATKELN PRPTVLTPTG
EKASTTGVES LPLDDPCFPI KAIALEDNAF AWLARFLQPV VGQCAGKTAL KQIQDAANNA
LIDRGYVTSR VLVPAQSLQS GTLTLRVVPG RISDIRTGKP AIGWARTALP TSAGVLLNQR
DIDQGLENVR RLQSQSDATF DIAPGMNPGD SELVFHPGTG KRWHAVIGAD NAGLDATGKY
ELSGSFTFDS PFHLYDQLQI AGTTNANIGA SEKGNQSVSA NYSVPIGYAM LTLNASRSRY
KQTVAGFGEP IEYSGVQSQL QAGLSGVIYR NAHARTEIHG NLFHKISRNS IDGVDIPVQH
RDIIGYELGV AHRQYIGDVV LDGSFAWRAS LPGLSSNSGT VVGTPDFDGK TQVELASLSA
QVPFRIGSQT FSYQFGWNMQ NARTPLTPSD YFTIGTRYAV RGFDQQLTLA AESGWVVSNE
LDWYVPTPVG TQALYAGVDA GRVRGPAAQY LLGETLVGAV VGVRGNLAPK NVLGAALNYD
VSLGFPLSKP EGFKTSSPTL LFQVSTLF
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