Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BamMC406_0302 |
Symbol | |
ID | 6177529 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia ambifaria MC40-6 |
Kingdom | Bacteria |
Replicon accession | NC_010551 |
Strand | + |
Start bp | 340591 |
End bp | 341568 |
Gene Length | 978 bp |
Protein Length | 325 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 641680047 |
Product | DNA-directed RNA polymerase subunit alpha |
Protein accession | YP_001807019 |
Protein GI | 172059367 |
COG category | [K] Transcription |
COG ID | [COG0202] DNA-directed RNA polymerase, alpha subunit/40 kD subunit |
TIGRFAM ID | [TIGR02027] DNA-directed RNA polymerase, alpha subunit, bacterial and chloroplast-type |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 0.521429 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 0.0299411 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGCAAACCA GTTTGCTGAA ACCCAAGATC ATCGCCGTGG AATCGCTTGG CGAGAACCAC GCGAGGGTGG TCATGGAACC GTTCGAACGC GGTTACGGCC ACACCTTGGG CAATGCGCTT CGCCGCGTGC TGCTGTCGTC GATGGTTGGC TACGCGCCGA CCGAAGTCAC GATCGCGGGC GTGGTGCACG AGTACTCGAC GCTTGATGGC GTGCAAGAGG ACGTCGTCAA CCTGCTGCTG AACCTGAAGG GTGTGGTGTT CAAGCTGCAC AACCGTGACG AAGTGACGGT TACCCTGCGC AAGGAAGGCG AAGGCGTCGT GACGGCCGGC GATATCGAGC TGGCGCACGA TTGCGAAGTC ATCAACCCGA ATCACGTGAT CGCACACCTG TCGAAGGGCG GCAAGCTCGA CGTTCAGATC AAGATCGAAA AGGGTCGCGG CTACGTTCCC GGCAACGTCC GTCGCTACGG CGAAGACACG GCCAAGATCA TCGGCCGCAT CGTCCTCGAC GCATCGTTCT CGCCGGTTCG CCGCGTGAGC TATGCCGTTG AAAGCGCACG TGTCGAGCAG CGTACCGACC TCGACAAGCT CGTGATGAAC ATCGAGACGA GCGGCGTGAT CACCCCGGAA GAGGCGATCC GTCAATCGGC CCGCATCCTG GTCGACCAGC TGTCCGTGTT CGCGGCACTG GAAGGCACGG AAACGGCTGC CGAAGCACCG TCGCGCGCGC CGCAGATCGA TCCGATCCTG CTGCGTCCGG TGGATGATCT CGAGTTGACG GTTCGTTCGG CGAACTGTCT GAAGGCCGAG AACATCTACT ACATCGGCGA CCTGATCCAG CGCACGGAAA ACGAGCTGCT GAAGACGCCG AACCTCGGTC GCAAGTCGCT CAACGAGATC AAGGAAGTGC TCGCTTCGCG CGGTCTCACG CTGGGCATGA AGCTCGAAAA CTGGCCGCCG GCTGGTCTCG ACAAGTAA
|
Protein sequence | MQTSLLKPKI IAVESLGENH ARVVMEPFER GYGHTLGNAL RRVLLSSMVG YAPTEVTIAG VVHEYSTLDG VQEDVVNLLL NLKGVVFKLH NRDEVTVTLR KEGEGVVTAG DIELAHDCEV INPNHVIAHL SKGGKLDVQI KIEKGRGYVP GNVRRYGEDT AKIIGRIVLD ASFSPVRRVS YAVESARVEQ RTDLDKLVMN IETSGVITPE EAIRQSARIL VDQLSVFAAL EGTETAAEAP SRAPQIDPIL LRPVDDLELT VRSANCLKAE NIYYIGDLIQ RTENELLKTP NLGRKSLNEI KEVLASRGLT LGMKLENWPP AGLDK
|
| |