Gene BamMC406_0300 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBamMC406_0300 
Symbol 
ID6178128 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia ambifaria MC40-6 
KingdomBacteria 
Replicon accessionNC_010551 
Strand
Start bp339285 
End bp339686 
Gene Length402 bp 
Protein Length133 aa 
Translation table11 
GC content62% 
IMG OID641680045 
Product30S ribosomal protein S11 
Protein accessionYP_001807017 
Protein GI172059365 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0100] Ribosomal protein S11 
TIGRFAM ID[TIGR03632] 30S ribosomal protein S11 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.0251281 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value0.0760469 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCTAAGG CTTCGAATAC CGCGGCGCAA CGCGTTCGCA AGAAGGTTAA GAAGAACGTC 
GCTGAAGGCG TGGTGCACGT TCACGCGTCG TTCAACAACA CGATCATCAC GATCACCGAT
CGCCAGGGCA ATGCACTGGC ATGGGCGACG TCGGGCGGCC AGGGCTTCAA GGGCTCGCGG
AAGTCGACGC CGTTCGCTGC TCAGGTTGCT GCTGAGTCGG CCGGTCGCGT GGCGATGGAA
TACGGCGTGA AGAATCTGGA AGTGCGGATC AAGGGCCCTG GCCCGGGTCG TGAGTCGGCG
GTGCGCGCAC TGCATGGCCT CGGCATCAAG ATCACCGCGA TTTCGGATGT CACCCCGATT
CCGCACAACG GCTGCCGTCC GCCGAAGCGC CGTCGTATCT AA
 
Protein sequence
MAKASNTAAQ RVRKKVKKNV AEGVVHVHAS FNNTIITITD RQGNALAWAT SGGQGFKGSR 
KSTPFAAQVA AESAGRVAME YGVKNLEVRI KGPGPGRESA VRALHGLGIK ITAISDVTPI
PHNGCRPPKR RRI