| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BamMC406_0299 |
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| Symbol | rpsM |
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| ID | 6177553 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria MC40-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010551 |
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| Strand | + |
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| Start bp | 338891 |
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| End bp | 339256 |
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| Gene Length | 366 bp |
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| Protein Length | 121 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 641680044 |
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| Product | 30S ribosomal protein S13 |
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| Protein accession | YP_001807016 |
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| Protein GI | 172059364 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0099] Ribosomal protein S13 |
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| TIGRFAM ID | [TIGR03631] 30S ribosomal protein S13 |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.0085038 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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| |
Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 0.0728223 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGGCTCGTA TCGCAGGGGT TAACATCCCG AATCACCAGC ATACCGAGAT CGGCCTGACG
GCAATCTTCG GTATCGGCCG CACGCGCTCG CGCAGCATCT GCTCGGCAGC TGGCGTGGAA
TTCTCGAAGA AGGTCAAGGA CCTGACCGAC GCAGACCTCG AAAAGCTGCG TGAAGAAGTG
GGCAAGTTCA TCGTCGAAGG CGATCTGCGC CGTGAAGTGA CGATGAACAT CAAGCGCCTG
ATGGACCTCG GTTGCTACCG TGGTGTCCGT CATCGCAAGG GCCTGCCGAT GCGCGGTCAG
CGTACGCGTA CGAACGCACG TACCCGCAAG GGCCCGCGTC GTGCAGCGCA AGCGCTGAAG
AAGTAA
|
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| Protein sequence | MARIAGVNIP NHQHTEIGLT AIFGIGRTRS RSICSAAGVE FSKKVKDLTD ADLEKLREEV
GKFIVEGDLR REVTMNIKRL MDLGCYRGVR HRKGLPMRGQ RTRTNARTRK GPRRAAQALK
K
|
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