Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BamMC406_0294 |
Symbol | rpmD |
ID | 6176359 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia ambifaria MC40-6 |
Kingdom | Bacteria |
Replicon accession | NC_010551 |
Strand | + |
Start bp | 336452 |
End bp | 336634 |
Gene Length | 183 bp |
Protein Length | 60 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 641680039 |
Product | 50S ribosomal protein L30 |
Protein accession | YP_001807011 |
Protein GI | 172059359 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG1841] Ribosomal protein L30/L7E |
TIGRFAM ID | [TIGR01308] ribosomal protein L30, bacterial/organelle |
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Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.00000487608 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 16 |
Fosmid unclonability p-value | 0.0630356 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCTGAAA AAACTGTCAA GGTTCAGCTC GTTAAGAGCC TGATCGGGAC CCGCGAATCG CACCGCGCGA CCGTGCGTGG CCTGGGCCTG CGCCGACTCA ACTCGGTTAG CGAGCTGCAG GACACGCCGG CGGTCCGCGG CATGATCAAC AAGGTCTCGT ACCTCGTTAA GGTCATCGCG TAA
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Protein sequence | MSEKTVKVQL VKSLIGTRES HRATVRGLGL RRLNSVSELQ DTPAVRGMIN KVSYLVKVIA
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