| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BamMC406_0286 |
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| Symbol | rplN |
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| ID | 6177506 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria MC40-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010551 |
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| Strand | + |
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| Start bp | 333011 |
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| End bp | 333379 |
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| Gene Length | 369 bp |
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| Protein Length | 122 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 641680031 |
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| Product | 50S ribosomal protein L14 |
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| Protein accession | YP_001807003 |
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| Protein GI | 172059351 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0093] Ribosomal protein L14 |
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| TIGRFAM ID | [TIGR01067] ribosomal protein L14, bacterial/organelle |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.0000002438 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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| |
Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 0.0225309 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGATCCAGA CCGAATCTCG GCTCGAAGTA GCCGACAACA CGGGTGCGCG TGAAGTCATG
TGCATCAAGG TGCTCGGCGG CTCGAAGCGT CGTTATGCCG GCATTGGCGA CATCATCAAG
GTGACCGTCA AAGAAGCAAC GCCGCGCGGG CGCGTGAAGA AAGGCGAAAT CTACAACGCC
GTGGTGGTCC GCACCGCCAA GGGTGTTCGC CGTCAAGACG GCTCGCTGAT CAAGTTCGAC
GGCAACGCCG CTGTGCTTTT GAATAACAAG CTTGAGCCGA TCGGCACCCG CATCTTCGGG
CCGGTGACGC GTGAGCTGCG TAGCGAACGA TTCATGAAGA TCGTTTCGCT GGCGCCGGAA
GTGCTGTAA
|
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| Protein sequence | MIQTESRLEV ADNTGAREVM CIKVLGGSKR RYAGIGDIIK VTVKEATPRG RVKKGEIYNA
VVVRTAKGVR RQDGSLIKFD GNAAVLLNNK LEPIGTRIFG PVTRELRSER FMKIVSLAPE
VL
|
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