Gene BamMC406_0272 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBamMC406_0272 
Symbol 
ID6177985 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia ambifaria MC40-6 
KingdomBacteria 
Replicon accessionNC_010551 
Strand
Start bp323255 
End bp323725 
Gene Length471 bp 
Protein Length156 aa 
Translation table11 
GC content60% 
IMG OID641680017 
Product30S ribosomal protein S7 
Protein accessionYP_001806989 
Protein GI172059337 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0049] Ribosomal protein S7 
TIGRFAM ID[TIGR01029] ribosomal protein S7, bacterial/organelle 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value0.971221 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value0.670435 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCGCGTC GTCGCGAAGT CCCCAAGCGG GAAGTGTTGC CGGATCCGAA GTTCGGCAAC 
GTTGATGTAG CCAAGTTCAT GAACATGCTG ATGCTGTCCG GCAAGAAGTC GGTCGCAGAG
CGCATCGTTT ATGGCGCATT CGAACAAATC CAGACCAAGG GTGGCAAGGA CCCGCTGGAA
GTGTTCACGG TTGCGCTCAA CAACGTGAAG CCGGTGGTCG AAGTGAAGAG CCGCCGCGTT
GGTGGTGCCA ACTATCAGGT TCCGGTCGAA GTGCGCCCGT CGCGTCGTAT GGCATTGGCG
ATGCGCTGGC TGCGCGAGGC TGCGAAGAAG CGCAGCGAGA AGTCGATGGC TCTGCGCCTG
GCAGGTGAAC TCTCCGAAGC GGCCGAAGGC CGTGGCGGCG CGATGAAGAA GCGCGACGAA
GTTCACCGCA TGGCAGAAGC CAACCGCGCG TTCTCGCATT TCCGTTTCTA A
 
Protein sequence
MPRRREVPKR EVLPDPKFGN VDVAKFMNML MLSGKKSVAE RIVYGAFEQI QTKGGKDPLE 
VFTVALNNVK PVVEVKSRRV GGANYQVPVE VRPSRRMALA MRWLREAAKK RSEKSMALRL
AGELSEAAEG RGGAMKKRDE VHRMAEANRA FSHFRF