Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BamMC406_0270 |
Symbol | |
ID | 6177655 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia ambifaria MC40-6 |
Kingdom | Bacteria |
Replicon accession | NC_010551 |
Strand | + |
Start bp | 320627 |
End bp | 322474 |
Gene Length | 1848 bp |
Protein Length | 615 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 641680015 |
Product | ATP-dependent DNA helicase RecQ |
Protein accession | YP_001806987 |
Protein GI | 172059335 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0514] Superfamily II DNA helicase |
TIGRFAM ID | [TIGR00614] ATP-dependent DNA helicase, RecQ family [TIGR01389] ATP-dependent DNA helicase RecQ |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 22 |
Fosmid unclonability p-value | 0.816269 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCCCGCG CCCTCGAAAT CCTCGACGAA GTATTTGGTT ATTCCGCGTT TCGCGGCCAG CAGGGCGAAA TCGTCGAACA CGTCGCCGGC GGCGGCGATT GCCTCGTGCT GATGCCGACC GGCGGCGGCA AGTCGCTGTG CTACCAAATT CCGGCGCTGC TGCGTCGCGA GGCCGGGCAG GGCGCGGGCA TCGTCGTGTC GCCGCTGATC GCGCTGATGC AGGACCAGGT CGCCGCGCTC AGCGAAGTCG GCGTGCGCGC GGCGTATCTG AACTCGACGC TGTCGGGCGC CGAAGCCGCG GCGACCGAGC GCGCGCTGCG CGAAGGCGAG ATCGATCTGC TGTACGTCGC GCCCGAGCGG CTGATGACGG GGCGCTTTCT CGAGCTGCTC GAACGCGCGA GGATCGGCCT GTTCGCGATC GACGAGGCGC ACTGCGTGTC GCAGTGGGGG CACGACTTCC GTCCCGAATA TATTCAGTTG TCGGTGTTGC ACGAGCGCTT CCCGTCGGTG CCGCGTATCG CGCTGACGGC CACCGCCGAC GCGATCACGC GCGACGAGAT CATCCATCGC CTCGCGCTCG ACGACGCACG CGTGTTCGTA TCGAGCTTCG ATCGCCCGAA CATCCGTTAC CGGATCGTCG AGAAGGACAA CGCGCGCGCG CAACTGCTCG ACTTCATCCG CGCGGAGCAT ACGAACGCGG ACGGCACGAC CGACGCGGGC GTCGTCTACT GCCTGTCGCG CCGCAAGGTC GAGGAAACGG CCGAATGGCT GAAGGCGCAG GGCGTGCGGG CGCTGCCGTA TCACGCGGGG ATGGAGTTCG AGGTGCGGCA GAAGCACCAG GAAATGTTCC AGCGCGAGGA AGGCGTCGTG ATGTGCGCGA CCATCGCGTT CGGCATGGGC ATCGACAAGC CGGACGTGCG CTTCGTCGCG CACCTCGATT TGCCGAAGAG CGTCGAAGGC TACTACCAGG AAACGGGCCG CGCGGGCCGC GACGGGATGC CGGCGAACGC GTGGATGGCG TATGGCCTCG GCGACGTCGT CCAGCAGCGC AAGATGATCG ACGAGTCCGA TGCGGACGAT GCGCACAAGC GCGTCCAGAC GTCGAAGCTC GACGCGCTGC TCGGGCTGTG CGAGACGATC TCGTGCCGGC GCGTGCGATT GCTGAACTAC TTCGGCGAGG CGAGCCAGCC GTGCGGCAAC TGCGACACCT GCCTTGAGCC GCCCGATTCG TGGGATGCGA CGCGCGAGGC GCAGATGGCG CTGTCGTGCG TGTTCCGCGC GCAGCGCGCG AGCGGTTTCA ATTTCGGCTC GAGCCATCTG ATCGAGATCC TGCGCGGCGG CCGCACCGAG AAGGTGCTGC AGCGCGGTCA CGATCAGCTC AGTACATTCG GGATCGGCGC GTCGCTGTCC GAGCCCGAGT GGCGTGCGAT TTTCCGGCAG CTCGTCGCAT ACGGCTATCT GGCGGTCGAC CATGGCGGAT TCGGCGCGCT TATGCTGACC GAGGCCGCGA AGCCGGTGCT GAAGAACGAG GAGAAGGTCA CGCTGCGTCG TTACGTGAAG CCGCAGCGCA CGCGCCAGTC GTCCAGCCGC AGCGGCACGC GGGTCGACCC GACGGCCGGC ATGGGCACGC GCGAGCGGGC CCGCTGGGAT GCGTTGCGTG CGTGGCGGGC GGAAACCGCG AAGTCCGACG GCGTGCCGGC CTACGTGATC TTCCACGACG CCACGCTTGC CGAAATCGCG CGCAATGCGC CCGAGACGAT CGAGGACCTG CGCCATATCC CCGGCATGGG CGTGCGCAAG CTCGAACGGT TCGGCGACGA GATCATCGAC GTCGTCGAAT CGGCATGA
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Protein sequence | MSRALEILDE VFGYSAFRGQ QGEIVEHVAG GGDCLVLMPT GGGKSLCYQI PALLRREAGQ GAGIVVSPLI ALMQDQVAAL SEVGVRAAYL NSTLSGAEAA ATERALREGE IDLLYVAPER LMTGRFLELL ERARIGLFAI DEAHCVSQWG HDFRPEYIQL SVLHERFPSV PRIALTATAD AITRDEIIHR LALDDARVFV SSFDRPNIRY RIVEKDNARA QLLDFIRAEH TNADGTTDAG VVYCLSRRKV EETAEWLKAQ GVRALPYHAG MEFEVRQKHQ EMFQREEGVV MCATIAFGMG IDKPDVRFVA HLDLPKSVEG YYQETGRAGR DGMPANAWMA YGLGDVVQQR KMIDESDADD AHKRVQTSKL DALLGLCETI SCRRVRLLNY FGEASQPCGN CDTCLEPPDS WDATREAQMA LSCVFRAQRA SGFNFGSSHL IEILRGGRTE KVLQRGHDQL STFGIGASLS EPEWRAIFRQ LVAYGYLAVD HGGFGALMLT EAAKPVLKNE EKVTLRRYVK PQRTRQSSSR SGTRVDPTAG MGTRERARWD ALRAWRAETA KSDGVPAYVI FHDATLAEIA RNAPETIEDL RHIPGMGVRK LERFGDEIID VVESA
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