| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BamMC406_0265 |
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| Symbol | rplA |
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| ID | 6177496 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria MC40-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010551 |
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| Strand | + |
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| Start bp | 309697 |
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| End bp | 310395 |
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| Gene Length | 699 bp |
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| Protein Length | 232 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 641680010 |
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| Product | 50S ribosomal protein L1 |
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| Protein accession | YP_001806982 |
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| Protein GI | 172059330 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0081] Ribosomal protein L1 |
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| TIGRFAM ID | [TIGR01169] ribosomal protein L1, bacterial/chloroplast |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 0.516489 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 0.64831 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCTAAGA TCTCCAAGCG CCGTCAGGCA TTTGCCGCTA AGGTCGACCG TCAGAAGCTG
TACGCGATCG AAGACGCACT GGCACTCGTG AAGGAATGCG CGAGCGCGAA GTTCGACGAA
TCGATCGACG TCGCAGTCCA GCTCGGCATC GATGCGAAGA AGTCGGACCA GGTCGTTCGT
GGTTCGGTCG TTCTGCCGGC AGGTACGGGC AAGTCGGTTC GCGTTGCCGT GTTCGCGCAA
GGCGAGAAGG CCGAGCAGGC GCGTGCAGCA GGCGCGGAAA TCGTCGGTAT GGAAGACCTG
GCTGAGCAGA TCAAGGCTGG CCAGATGGAC TTCGACATCG TGATCGCTTC GCCGGACACG
ATGCGTATCG TCGGTACGCT CGGTCAGATC CTCGGCCCGC GCGGCCTGAT GCCGAACCCG
AAGGTCGGCA CGGTTACGCC GGACGTCGCG ACGGCAGTCA AGAACGCGAA GGCTGGTCAG
GTGCAATTCC GTGTCGACAA GGCCGGTATC ATCCACGCGA CCATCGGCCG TGCATCGTTC
GAAGCTGCAG CACTGCGCTC GAACCTGTCG GCACTGATCG AAGCGCTGCA GAAGGCGAAG
CCGGCAACGA GCAAGGGTGT CTACCTGCGC AAGGTCGCAC TGTCGAGCAC GATGGGCGTC
GGCCTGCGTG TCGACCAGGC TACGCTGGCA GCACAGTAA
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| Protein sequence | MAKISKRRQA FAAKVDRQKL YAIEDALALV KECASAKFDE SIDVAVQLGI DAKKSDQVVR
GSVVLPAGTG KSVRVAVFAQ GEKAEQARAA GAEIVGMEDL AEQIKAGQMD FDIVIASPDT
MRIVGTLGQI LGPRGLMPNP KVGTVTPDVA TAVKNAKAGQ VQFRVDKAGI IHATIGRASF
EAAALRSNLS ALIEALQKAK PATSKGVYLR KVALSSTMGV GLRVDQATLA AQ
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